Gene Memar_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2387 
Symbol 
ID4848199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2367267 
End bp2368499 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content67% 
IMG OID640117097 
Producthypothetical protein 
Protein accessionYP_001048292 
Protein GI126180327 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGAGA TCATCGCGAT CATCGGGGGA GGCCCTGCCG GGCTCTTCTG CGCCCTGCAG 
GCGATAGAAG CCGGGAAAAA CGTCGTCCTC TTCGAGAAGA AGCCCGTAGC GGGGAGGAAA
CTCCTCATTG CCGGGTCGGG GCAGTGTAAC ATCACCCACG ACGGCGATAT CGCTGACTTC
CTCTCCCATT ACGGCGATCA CGGGGCGTTC CTCCGGCCGG CGCTCATGAA CTTCACGAAC
CGGGATCTCA TTGCGTTTTT TGCCGACCGC GGCCTTCGGA TGGAAACCGA GCCCGGGGGT
AAGGTCTTCC CGGCGACCCG GAAGTCCGCC GATGTCCTCG CCGTCCTCCT CGCGGAGTGC
GCCGCCCGTG GGGTGGAGAT ACGGTGCAAC GACCCTGTCC TTGCCGTCGA ACGCGACGGC
GACGGGTTCA TCGTCCGGAC GGCGACGGCG GCCGTCCGGA CCGGCGTCCT CGTCCTCGCC
ACCGGCGGGG CCTCTTACCC CGCCACCGGC TCGACCGGTG ATGGCTACGC CTTCGCCCGG
GCGCTCGGGC AGCCGACAAC GGAGGTCGCC CCGGCGCTTG CCCCGGTCTA CGTCGAGGAC
TACCCGTTCG CCGACCTTGC CGGGATCTCC TTTCAGAACC TCACCCTGGC CGTCTACCGC
GACGGAAAGC GGGTCGGGCG GCACGCCGGC GATCTTTTGC TGACGCACAC CGGGCTCTCG
GGCCCGGGTA TTCTCGATCT CTCCCGCTCC ATCCGCCCCC GCGACGAACT CCGGGTCACG
TTCCTCCCCG GGGCGAGCGC GGAGGAGGTG CGAAAGCATC TCGCCGACGC GATTGCGGCG
GGCGGGGCCC GGCAGGTAAA GACCGTGCTC TGCGATCTCG CCCTCCCCGA ACGGTTCGTC
CGGCGGCTGC TCGACCTCGC CGGGATTCCG GCGGGAGAGA CCTGCGCCCA GCTCCGGAAA
AATTCCCGGA ACGCGCTCGC CGCATCCCTC GCGGAGTACC CGTTCCGGGT GGAGAGGCTC
GGCGGGTTCA ACGAAGCGAT GGCGACGCGG GGCGGGGTCG CTCTCGAGGG AATCAACAAA
AAAACGATGG CGTCAAAGAT CGTCGAAAAC CTCTACTGCA TCGGCGAGAC ACTCGATATC
GACGGCGACA CCGGCGGCTA TAATCTCCAG GCCGCCTTCT CCACGGCAGC GCTTGCCGCA
GGGCATATCG CCGGCGTTTA CGCTTCCCGG TGA
 
Protein sequence
MNEIIAIIGG GPAGLFCALQ AIEAGKNVVL FEKKPVAGRK LLIAGSGQCN ITHDGDIADF 
LSHYGDHGAF LRPALMNFTN RDLIAFFADR GLRMETEPGG KVFPATRKSA DVLAVLLAEC
AARGVEIRCN DPVLAVERDG DGFIVRTATA AVRTGVLVLA TGGASYPATG STGDGYAFAR
ALGQPTTEVA PALAPVYVED YPFADLAGIS FQNLTLAVYR DGKRVGRHAG DLLLTHTGLS
GPGILDLSRS IRPRDELRVT FLPGASAEEV RKHLADAIAA GGARQVKTVL CDLALPERFV
RRLLDLAGIP AGETCAQLRK NSRNALAASL AEYPFRVERL GGFNEAMATR GGVALEGINK
KTMASKIVEN LYCIGETLDI DGDTGGYNLQ AAFSTAALAA GHIAGVYASR