Gene Memar_2359 details

Gene Information

• Locus tag: Memar_2359
• ID: 4846861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 2346401
• End bp: 2347069
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640117069
• Product: hypothetical protein
• Protein accession: YP_001048264
• Protein GI: 126180299
• COG category: [H] Coenzyme transport and metabolism; [K] Transcription
• COG ID: [COG1339] Transcriptional regulator of a riboflavin/FAD biosynthetic operon

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGAAG CGGAAGATCT GCAGTCCCTG AAGACGATCG CCCTGCTCGG CGGGTGCCGG 
GGGCCTATCT GGCTCTCGTC GCAGTCGCTC GGTAGCGTAC TGGGTATCAG CCCCCAGACC 
GCTTCGCGGC GGCTGATCGC GCTTGAGCGG CAGCAGTTCG TCACCCGATC GATGAAGCCC 
GACGGTCAGT ACGTCGCCGT CACCCGGGAG GGCGAGCAGG CGCTGAAGCG GGAATACGCG 
GATTACGTCC GGATCTTCAA CCCGGATCAG AGGGGGTACA CCCTGACCGG GACGGTGATC 
AGCGGGCTCG GGGAAGGCCG TTACTACATG AGCATCCCTC ACTACAAGGA GCAGTTCGGC 
GGGTGTCTCG GGTTCGAACC CTTCCCCGGA ACCCTGAACA TCAGGCTCGA TGCGGCGAGC 
ATCGCGGTCA GAAAGCATCT CGATCACGCC GGGTGGATCG ACGTTCCCGG ATTCACCGCC 
GACGATCGGA CGTTCGGCGG CGCACGGGTG CTCCCCTGCC TGATCAGGGG GTACAGGTGC 
GCGATAGTCG TGCCCTCCCG CACTCATTAC CCGGAGGATA CCATCGAGGT CATCGCCGGG 
TGCGAACTCC GCAAAGCCCT GAACCTGAAC GATAACGATA CGATCGAGGT GGAGATTACC 
CATGATTGA 

 

Protein sequence

MVEAEDLQSL KTIALLGGCR GPIWLSSQSL GSVLGISPQT ASRRLIALER QQFVTRSMKP 
DGQYVAVTRE GEQALKREYA DYVRIFNPDQ RGYTLTGTVI SGLGEGRYYM SIPHYKEQFG 
GCLGFEPFPG TLNIRLDAAS IAVRKHLDHA GWIDVPGFTA DDRTFGGARV LPCLIRGYRC 
AIVVPSRTHY PEDTIEVIAG CELRKALNLN DNDTIEVEIT HD