| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2355 |
|---|
| Symbol | |
|---|
| ID | 4846837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2343850 |
|---|
| End bp | 2344416 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640117065 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001048260 |
|---|
| Protein GI | 126180295 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3390] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCC AGAGCGCATT CGAGCGCGAA CCGGCACGAA GGGTCTTCGC ATCCGAGCTC
CGCGAGACTC GCTACCAGTT CAAGGACGGC GAGGACGAGA AGAGCCCGAC CTACGTCATC
CTCCCGAGCG GGATCCGGAG CAACCGGATC TTCATCGCCG GGACGCTCAC CGAGAAGCAG
CGGCAGGGCG ACCAGAACAT CTTCTATCGC GGAAGGGTGG TCGACCCGAC GGGCACCTTC
TTCATCATGG CGGGCTCCTA CCAGCCCGAG GCGATGCAGC AACTTGCCCG GATAGAGCCG
CCGGCCTTCG TCGCCGTCGT CGGGAAACCG AACCTCTACA CGACCCCGGA CGGGAACTGC
CTGGTCTCGG TCCGCGTGGA GTCGATCACG GTCGTGGACC GCGAGACCCG CGACCTCTGG
GTGCTCGATA CCGCCCGCGA AACCCTGGAC CGGTTGGATG CCTTCGGCAC CACCGACGAC
TCGAAGAAGG CCCAGGAGGA GTACGGGACA CAGCCCGACC TCTACAAAAA GATCGTCTAC
GACGCGCTCA CCCAGGTGCA GTTGTAG
|
|---|
| Protein sequence | MKPQSAFERE PARRVFASEL RETRYQFKDG EDEKSPTYVI LPSGIRSNRI FIAGTLTEKQ
RQGDQNIFYR GRVVDPTGTF FIMAGSYQPE AMQQLARIEP PAFVAVVGKP NLYTTPDGNC
LVSVRVESIT VVDRETRDLW VLDTARETLD RLDAFGTTDD SKKAQEEYGT QPDLYKKIVY
DALTQVQL
|
|---|
| |