Gene Memar_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2344 
Symbol 
ID4848130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2330526 
End bp2332412 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content64% 
IMG OID640117054 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001048249 
Protein GI126180284 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGG CCGGGGGCGG GAGACCGCTC CGATTCGGTA CGCACCTGGT CCTCGTCATG 
ATCGTGATCA CGCTCCCGGT GATCGGGCTG ATCTCGGCCC TGGATTACCG GCAGGTCGAG
GAGGCCCTGA TAGCCGAGGA GGATCGCCTC CGGGAGCAGA CGGAGAGGAG CGCCGTCCAG
TCGATACGTC TTATGGACGC GGGCCTGAAC CTCTTCGACT GCACGCTCGA TCACCGGATG
CAGGAGGCGT TCATCCCGGT TCTGGCCGAA TACAAGCGGG CGGGAGGAGA TCCGGAAGAG
ATGGATCTCT CCCGCGTCAA GGAACTCCTC GGGGGGGAGA CGGACGTCTA CATCATCAAC
GACTCGGGTG TCATCGAGTA TACCACCTAC CCTCCGGACC TCGGCATCGA TTTCCGTGAG
GTTCCGTCTT TTTACAACCG GATAACGGAA ATCCGGCTCG GCGACGCGTT CACGGCCGAC
CGGGTCATGG CGGAGCCGGC GAGCGGGCGG TTGCGAAAGT ACGCCTACAT GCCCTCCCCG
GATCACCGCT ACCTCTTCGA GCTCGGGCTC GTCTGCAGTT CCGTGGGGAC CGACCGGTTC
GATCTGAAAT ACCGGGCCCT CAAAGACGAC CTGATGCGGT TGAACCCCGC GCTCGAAGGG
ATCCGGATCT TCGACTGTTA CGGGAGATCC GTCAACGCGA CCGAGTCGGA GAGCCCAACC
GATCCCGCCG CCATCGATTT CGTTGCCCGT GCGGTCTATG AAGAGAAACG GGACCGGACA
ATAACGGATC CGGTAGCGGG ACAGATCGTC CGGTACGTCC TTGTCGACCT CTCCGCTGCC
GGATCCCCCT CGGACGCGAG CCGGGTCGTC GAGTTGACCT ACAGCACCGC CCCTCTCGAT
ACCCGGCTTG CCGAGATGCG TCTCACTCAC GTTCTCCTCG CGTTCTTCGC AAGTCTCGCC
GCCTGCTGCA TCGCGGTCCC GGTTTCGCGG CAGATAACAC GCCCGGTACG GGAGATCGTC
GACGACGTCA ACACCATAGC CCGGGGGGAT CTCGATCACC GGATCCGGGT ATCCGCGGGA
ACGGAGTTCA CCCGTCTCCA AGGAAGCATC GATGCCATGG TCGACGCTCT TAAAGAGAAT
ATCCGGCGCC TTCACGCTTC GGAGGAGACG GCACGAGGGT ACAGCACCCG GCTTGAAGAT
CAGGTCCGGG AACGGACCGC CGACCTCGAG GAATCGAACC GGGCGGCAAC CCTCTTTCTG
GATATCATGG TCCACGACAT CAACAATGCA AACGCCGTCG CTATCGGGTA TACCCGGCAC
CTCGTCGATG CGCTTGAAGG AGAACGGCGG GGGATGGCCG AGAAGATGCT CTCCCGGCTC
GAACAGAGTT CCGCGATCAT CGGGGGCATC GCCACTCTCC GGGAGGCCCT GGAGAGCGGG
AACGCGTTGA CGCGGGTGGA TCTCGACCGG GTGATCCGCA CGGAGATGGC GAACCATCCC
GCGATCCGGA TCCGGTATGA GGGGCACCCG ATTGCAGTCC TCGCCGACGA CCTGCTCTCC
GAGGTCTTTG CGAACCTCAT CGGCAACGCG GTGAAGTTCG GCGGGCCGGC GGTCGAGATC
GCTGTCCGGG TCGAAGAGCG CGGGAAGGAG ATGCTGGTCT CGGTCGAGGA TACCGGGCCG
GGTATCCCCG ATGCGGTGAA GAGCGAACTC TTCCGCCGCT TCCGGAGAGG GGAAGGCCCG
CTTACGGGGG CAGGTCTCGG GCTCTACATC TGCCGGATGC TTATTACGCG GTACGGCGGG
AGTATATGGG TGGACGACCG GGTGGAAGGG CGGCCGGAGG AGGGAGCGGC CGTCCGGTTC
ACGCTCCGGA AGGTGCCGGG GGAATAA
 
Protein sequence
MTAAGGGRPL RFGTHLVLVM IVITLPVIGL ISALDYRQVE EALIAEEDRL REQTERSAVQ 
SIRLMDAGLN LFDCTLDHRM QEAFIPVLAE YKRAGGDPEE MDLSRVKELL GGETDVYIIN
DSGVIEYTTY PPDLGIDFRE VPSFYNRITE IRLGDAFTAD RVMAEPASGR LRKYAYMPSP
DHRYLFELGL VCSSVGTDRF DLKYRALKDD LMRLNPALEG IRIFDCYGRS VNATESESPT
DPAAIDFVAR AVYEEKRDRT ITDPVAGQIV RYVLVDLSAA GSPSDASRVV ELTYSTAPLD
TRLAEMRLTH VLLAFFASLA ACCIAVPVSR QITRPVREIV DDVNTIARGD LDHRIRVSAG
TEFTRLQGSI DAMVDALKEN IRRLHASEET ARGYSTRLED QVRERTADLE ESNRAATLFL
DIMVHDINNA NAVAIGYTRH LVDALEGERR GMAEKMLSRL EQSSAIIGGI ATLREALESG
NALTRVDLDR VIRTEMANHP AIRIRYEGHP IAVLADDLLS EVFANLIGNA VKFGGPAVEI
AVRVEERGKE MLVSVEDTGP GIPDAVKSEL FRRFRRGEGP LTGAGLGLYI CRMLITRYGG
SIWVDDRVEG RPEEGAAVRF TLRKVPGE