Gene Memar_2343 details

Gene Information

• Locus tag: Memar_2343
• ID: 4846989
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 2328451
• End bp: 2330328
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640117053
• Product: integral membrane sensor signal transduction histidine kinase
• Protein accession: YP_001048248
• Protein GI: 126180283
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAACG ACCGCACACC TGTTTCGGAA GGCTGGCCGT TTACGCCTAC TCTTGTCGTA 
GCCATCCTGC TCATCGTCAT CCCCGCCATC GCCCTCCTCG CGGCCCACGA CTACGTTCTG 
GCGGAAGAGA GGATGACCTC CGACCTCGCC ACCCTCCAGA GCGTCACCGA AAAGAGCGTC 
AGGGAATCGA TCGTGGATGT GGATACCGGC CTCAAACTCT TTGACGATTC CCTCAACCTG 
CGGTTGCAGA GGGGGTTTTT GCTCTTTCTT GAGGAGTATG AGCGGGCGGG AGGGGATCCG 
TCGCAGATGA ACCTCCCGGC GCTCAAAGAC GAGCTCGGGG GAGATATGGA TCTTTATGTC 
GTCAACTCGT CGGGAGTCGT CGAGTACACC ACCTATCCTC CCGATCGAGG CCTCGATTTC 
AGGAACGTCC CGGGTTTTTA TGACGAGCTC ACCCGGATGC GTCTTGGAGA CGAGTTCTCC 
CCCGACCGCG TGGTGTACGA GCCCGCAACC GGGCAGGTCC GGAAGTATGC GTATATGCCC 
ACGCCGGATC ACCGCTACCT TCTCGAACTC GGGCTCGCGC CGGATGCGTT CATGGAGGAG 
CGGAACCGTC TGCGCTCGCA GGAGAGCACG CAGGAGTTCG TTGCCATGAA CCCGTATCTC 
GATTCGATCC GCGTATACGA TATCTTCGGC AACCCCGTCG GGATGCCGGA CGGCTCTGTC 
GATGCCCGGA CACGGGAGTT CGTCACCGGG ACGGTCATCC CCGGCCGAAC TGATTACGCG 
GTGCAGGATG AGCACGGAAG GCGGATCCAG TATCTCTTCA TCGACCTGAA AGACCCGGAT 
TACCCGTCCG ACCCGAGCGT CGTCGTCGAA CTGACCTATG ATACGGGACT CATACAGAGC 
CAGCTCGACC AGTTGCTCTA CTCCCGCGCC GTCGTTGCAA TCCTTGCAAT CGTTCTCTCG 
AGCGCGGTCA TCTTCCTTGT AGCGCGCCGC CTCACGCGCC CCCTCGAGGA GATCATCGAC 
GACGTCGACG TCATCGCGCA GGGAGACCTC AACCATACGA TCCGTGTCTC GGCAACCCGC 
GAGGTGATGA AACTCGAGCG GAGCATCAAC ACGATGGTCG CGGCTCTCCA AGCGGGGATG 
AAGAGCCTCA GGGAATCGGA AGAGACGATC AGGGAGTACA GCGGGCACCT GGAGGAGCAG 
GTTGCAGCAC GCACGGCGGA ACTGCAGGAG TCGACCGAGC GGGCGAACCT TTACCTGGAC 
ATCATGACGC ACGACATCAA AAATACCATC AGTACCGCCA CGCTTTACAC CGATCTCCTC 
ACGGAAGAAC TCGAGGGCGA GCAGCGGAAT TATACTGAAA AGGTGCAGAA AAGCCTCAAA 
AAGAGTGTCG AGATCATCAG AAACGTCAAC ACCATCAGGC AGATCCGGGA AGAGGCTGCC 
GTCCTCGGCC CGGTTGCTCT CGATCCCGTT ATCCGGGCGG AGATCGAGCA CTTTCCCGAT 
GTGCGGATCA CCTACGCGGG GACAACCGCC CGGGTGCTCG CCGACGATCT CCTCTCCGAG 
GTCTTCACGA ACCTCATCGG CAACGCGGTG AAGTTCGGCG GGCCCGCGGT CGAGATCGCC 
ATCCGGGTCG AGGAGCACGG CGGAGACGTG TTGGTCTCGG TCGAGGACAC CGGGCCGGGT 
ATCCCCGACG AGATGAAGGA ACGCCTGTTC ACCCGTTTCG GCGGCGGGGG AGTTGAAAAG 
AGCGGTCGGG GCCTCGGTCT CTATATCTGC CGGATGCTTA TTGAGCGCTA CGGTGGGAGG 
ATATGGGCGG AGGACCGGGT GGAGGGGGAG CCGGAGGAGG GAGCGGCCGT CCGGTTCACC 
CTCCGGAAGG CCGGGTGA 

 

Protein sequence

MKNDRTPVSE GWPFTPTLVV AILLIVIPAI ALLAAHDYVL AEERMTSDLA TLQSVTEKSV 
RESIVDVDTG LKLFDDSLNL RLQRGFLLFL EEYERAGGDP SQMNLPALKD ELGGDMDLYV 
VNSSGVVEYT TYPPDRGLDF RNVPGFYDEL TRMRLGDEFS PDRVVYEPAT GQVRKYAYMP 
TPDHRYLLEL GLAPDAFMEE RNRLRSQEST QEFVAMNPYL DSIRVYDIFG NPVGMPDGSV 
DARTREFVTG TVIPGRTDYA VQDEHGRRIQ YLFIDLKDPD YPSDPSVVVE LTYDTGLIQS 
QLDQLLYSRA VVAILAIVLS SAVIFLVARR LTRPLEEIID DVDVIAQGDL NHTIRVSATR 
EVMKLERSIN TMVAALQAGM KSLRESEETI REYSGHLEEQ VAARTAELQE STERANLYLD 
IMTHDIKNTI STATLYTDLL TEELEGEQRN YTEKVQKSLK KSVEIIRNVN TIRQIREEAA 
VLGPVALDPV IRAEIEHFPD VRITYAGTTA RVLADDLLSE VFTNLIGNAV KFGGPAVEIA 
IRVEEHGGDV LVSVEDTGPG IPDEMKERLF TRFGGGGVEK SGRGLGLYIC RMLIERYGGR 
IWAEDRVEGE PEEGAAVRFT LRKAG