| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2341 |
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| Symbol | lysS |
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| ID | 4846458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 2326708 |
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| End bp | 2328234 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640117051 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001048246 |
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| Protein GI | 126180281 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX
[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA TGGATCACAC CTGTTTTGAC ACGGCAAAGA TCGATAAGTT ACAGGAACTG
CGCGAGCGCG GGGTGACGGT CTACCCCTAC ACCTTCGACC GCAGGGATAC CGTCGAGGAG
ATCAAGGAGC GGTTCTCCGC GATCGAGCAC GATAAGAGCG AGGAGGAGGT CAGCACCGCG
GGGCGGGTCT ACGTCGTCCG CCAGCACGGC AAGACGATCT TCGCCGATAT CGGCGACTCC
GAAGGCCGGA TCCAGCTGTA TCTGCGGAAG AACGACCTCG GCGAGGAGCA GTTCGACCTC
TTCAAGCAGT ACGTCGACGC CGGCGACATC GTCGGCGTCG TCGGCCACGT CTTCCGGACG
AAAATGGGCG AGATCACCGT CTGGGTCGAC CGGTTCGAAC TCCTTACGAA ATCGGTCTGC
CCGCTTCCCG AGAAGTTCCA CGGGCTCAAG AACGTTGAGA CCCGCTATCG GCAGCGCTAC
CTCGACCTGA TCATGAACGA GGAGAGCCGC GAGACCTTCA GGGCGCGGAG CAGGATCATC
TCCCTCCTGC GACAGTTCCT CTTCGAGCGG GACTACCTGG AGTTCGAGAC GCCCACCCTG
CAGCCGATCT ACGGCGGCGC GAACGCCCGG CCGTTCACCA CCCACCACAA CGCCCTCGAC
CAGAAACTCT ACCTCAGGAT AGCGCCGGAA CTCTACCTCA AACGCCTGGT CGTCGGCGGG
TTCGATAAGG TCTTCGAGAT CGCGAAGAAC TTCAGGAACG AAGATATCGA CACCAACCAC
AACCCCGAGT TCACGATGGT AGAGGTCTAC GAGGCCTACC GCGACTACAA CGACATGATG
AACCTCACCG AGGAGATCCT CTCCCACCTC GCGGAGAAGG TGCTCGGGAC GACCGTCTGC
TCGTTCGCCG GGCACGACCT GGACTTCTCC CGCCCCTGGC GCCGCCTCAC GATGGAGGAG
GCGGTGCGGG AGTACGCCGG GATTGACTTC CCGGCCATGA GCCTCGAAGA ACTCCACGCC
TTCGGCCTCG AGCACTGCGT CGAGGGCTGC GAGAGCGCCG CGACCCGGGG CGAGTACCTG
GTGCTCTTCT TCGAGCACTT CGGCGAGAAG CACCTCATCC AGCCGACATT CATCTACGAC
TTCCCGATCG AGAACTCGCC GCTCGCAAAG AAGCACCGCT CAAAAGAAGG GCTGACGGAG
CGGTTCGAGC TCTTCATCGC CGGGATGGAG ATGGCGAACG GCTTCTCGGA GTTAAACGAC
CCCCTCGACC AGAAAGCCCG GCTCGAACAG CAGGACGCGA AACGCCGGAA GGGCGACCTC
GAGGCGCAGA TGATCGACTA CGACTTCATC AACGCGCTCG GCTACGGGAT GCCTCCGACG
GGCGGCGTCG GGATCGGGAT CGACCGGCTG GTGATGCTCC TCACCGGCAA GGACTCGATC
AAGGAGGTCC TCCTCTTCCC GCAGATGAAG ACCGCCGTCC CCGGGCAGAA CGGGGACAAA
GCGGAAGAAG GCGATGGGGA AGAGTGA
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| Protein sequence | MSDMDHTCFD TAKIDKLQEL RERGVTVYPY TFDRRDTVEE IKERFSAIEH DKSEEEVSTA
GRVYVVRQHG KTIFADIGDS EGRIQLYLRK NDLGEEQFDL FKQYVDAGDI VGVVGHVFRT
KMGEITVWVD RFELLTKSVC PLPEKFHGLK NVETRYRQRY LDLIMNEESR ETFRARSRII
SLLRQFLFER DYLEFETPTL QPIYGGANAR PFTTHHNALD QKLYLRIAPE LYLKRLVVGG
FDKVFEIAKN FRNEDIDTNH NPEFTMVEVY EAYRDYNDMM NLTEEILSHL AEKVLGTTVC
SFAGHDLDFS RPWRRLTMEE AVREYAGIDF PAMSLEELHA FGLEHCVEGC ESAATRGEYL
VLFFEHFGEK HLIQPTFIYD FPIENSPLAK KHRSKEGLTE RFELFIAGME MANGFSELND
PLDQKARLEQ QDAKRRKGDL EAQMIDYDFI NALGYGMPPT GGVGIGIDRL VMLLTGKDSI
KEVLLFPQMK TAVPGQNGDK AEEGDGEE
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