Gene Memar_2334 details

Gene Information

• Locus tag: Memar_2334
• ID: 4847401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 2321410
• End bp: 2322069
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640117044
• Product: phage SPO1 DNA polymerase-related protein
• Protein accession: YP_001048239
• Protein GI: 126180274
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1573] Uracil-DNA glycosylase
• TIGRFAM ID: [TIGR00758] uracil-DNA glycosylase, family 4

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATAAGA AGGTTATACG AGTTATCCTC AATAGTGTGG GCATGGTACA GGATGCGGGG 
GGAGAGGCGG CGATAGAGGA ACTTGCCGCC GTCATCGGCG AATGCCGGAA ATGCCTCCTC 
TGGGAGAACA CTCACCATGC AGTCCCGGGA GAAGGGAACC CCCGGGCCGA CCTCATGCTC 
ATCGGCGAAG CGCCGGGGAA ACAGGAAGAC CTCACCGGGA GGCCGTTTGT CGGTCGGGCG 
GGAAAACTCC TCGAAGGCCT CCTATCGGGT ATCGGCTTAT CGCGCGACGA CGTCTTCATC 
GCGAACATCG TCAAGCACCG GCCGCCCGGG AACCGCGACC CCGGTGAAGA GGAGATCCGG 
GCCTGCACCC CGTACCTCGA GGAGCAGATC CGGATCATCG GGCCGAAGGT GATCGTGATG 
CTCGGCCGGC ACTCGAGCAG GTATATCCTC TCCTTCCTGC CGGTCGAGTT CGACCGGATC 
ACGGAGATCC GGGGGACGGT CTACCCCGGC CTCCTCTTCG GCCATCCGGT CCGCCTCATC 
CCCACCCTCC ACCCTGCCGC CGCGCTCTAC AACCCCCGAT ACCGGGAGTC CCTGGAAGAG 
GATTTCCTGA TCATCGGGCG CGAACTCGCG GAGGCCGGAG ACTTCACGAC ACAGGATTGA 

 

Protein sequence

MHKKVIRVIL NSVGMVQDAG GEAAIEELAA VIGECRKCLL WENTHHAVPG EGNPRADLML 
IGEAPGKQED LTGRPFVGRA GKLLEGLLSG IGLSRDDVFI ANIVKHRPPG NRDPGEEEIR 
ACTPYLEEQI RIIGPKVIVM LGRHSSRYIL SFLPVEFDRI TEIRGTVYPG LLFGHPVRLI 
PTLHPAAALY NPRYRESLEE DFLIIGRELA EAGDFTTQD