| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2331 |
|---|
| Symbol | |
|---|
| ID | 4846235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2319787 |
|---|
| End bp | 2320554 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640117041 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001048236 |
|---|
| Protein GI | 126180271 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTCG ACGTCGACGG CGTGGCGTTC AATTACCGGA GCGCTTCGGT CATCCGGGAT
ATCACGTTCG ACCTTCGACC GCACCAGACT CTCGCGATCC TGGGGCCGAA CGGTGTCGGG
AAGACGACGC TCTTGAAGTG CATGAACACC ATCCTGCGGC CGAAGGCCGG GTCCGTCCTC
ATCGAGGGGG CCGACCTCCT CACCGCGGAC AGGATGGAGA TCGCACGGAA GGTCGGCTAC
GTCCCGCAAC GGTGCGAGGC GGCCCGGTTG ACCGTCTTCG ACGCCGTCCT CCTCGGCCGC
CGGCCGCATA TCGGGTGGGA CGTGACGGAC AAGGACATAC GGATCGTCGA GGCAGCAGTC
CGGATGCTCC ACCTCGAGGA CCTGAAGCTG CGCTACATCG ACGAGATGAG CGGCGGGGAG
CTCCAGAAGG TGAGCATCGC GAGAGCGCTT GTGCAGGAGC CCCGGGTGCT CCTCCTCGAC
GAACCGACGA GCAGCCTCGA CCTCAAGAAC CAGCTCGAGA TCCTCGGGAT CGTCCGGCAC
GTGACGACGG AGCACGACGT CGCCGCGGTG ATGACGATGC ACGACCTGAA CATGGCGCTT
CGCTACGCCG ACCGGTTCAT TCTCTTAAAG GACGGCATCA TCCATGCCGC GGGGGGCCCC
GACGTGGTGA CGCCGGAGAT CATCGAGGCG GTTTACGGCG TCCCCGTGAC GGTCGAGCGG
TACAACGGAT ACCGCTTCGT CGTGCCCCTG GAACCGGAGA GCGCCTGA
|
|---|
| Protein sequence | MILDVDGVAF NYRSASVIRD ITFDLRPHQT LAILGPNGVG KTTLLKCMNT ILRPKAGSVL
IEGADLLTAD RMEIARKVGY VPQRCEAARL TVFDAVLLGR RPHIGWDVTD KDIRIVEAAV
RMLHLEDLKL RYIDEMSGGE LQKVSIARAL VQEPRVLLLD EPTSSLDLKN QLEILGIVRH
VTTEHDVAAV MTMHDLNMAL RYADRFILLK DGIIHAAGGP DVVTPEIIEA VYGVPVTVER
YNGYRFVVPL EPESA
|
|---|
| |