Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2328 |
Symbol | |
ID | 4848311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 2316072 |
End bp | 2317226 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640117038 |
Product | periplasmic binding protein |
Protein accession | YP_001048233 |
Protein GI | 126180268 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCGC CAAAATACAC CGGAATGTTC ACGGCCGCAG TGCTCGCGGC CCTCGTTCTC GCCATGTTCG CCGCCGGGTG CACCGGCACC GGGACCGTCC AGGGCGGCAC CGGCGAGACC GTCACGGTCA CCGACGGGTT CGGCCGGACC GTCGCCGTCC CGTCGCCCCC GGAGAGCGTC GTCTGCTCGG GCTCCGGATG CCTCCGCTAC CTCGTCTACC TCCAGAGCCA GGACCTCGCC GTCGGCGTCG ACGACATCGA GAAAGAAGAG CGGACGATCG AAGGCCGTCC CTACTCCCTC GCCTACGGAT CACAGTTCAA AGATCTCCCC CTGATCGGTG AGTTCCGGGG CAAGGACGAC CCCGAGAAGA TCCTCGGGAT AGGCCCGCAA GTCGTTTTCA AGACCGGCTC CACCGGAACG GCATACGCGA CCAGTGCCGG TGATGCAGAT AAACTCCAGG AGAGAACCGG CATCCCCGTC GTGGCGTTCC CCTACGGCTC GCTCCGGAAC GACGCCGAAA AGGCTGAGAT GTACACCGGA CTCCGCACGA TGGGCGGGGT TCTCGATAAG CAGGACCGCG CCGAAGAGGT GATCGCCTAC ATCGAGGCGA CGATCGCCGA CCTCAAAGCC CGGACCGCCG ACATCCCCGA GGCGGAACGG AAGACAGCCT ACATCGGCGG CGTCTCCTCG GCGGGCGCTC ACGGCATTAT CTCCACAGAA CCCGCCTACC CACCATTCCA CTGGGTCAAC GCAAAGAACG CCGCGGCCGG ACTCGGCACC GCCCACGCCG ACGTCGCGAA AGAGGCCCTC GTCGACTGGA ACCCCGGGTA CATCTTCGTC GATGTCGGCA CCATCCAGAT GGAGAGCGAC GGGGCGATCG GGGAACTGAA GAGCGACCCT GCACTCCAGG GGCTCTCCGC CGCGAAGGAA GGCCGGGTCT ACGGCGTCCT CCCGTACAAC TTCTACAGCA CGAACTACGA GACCGTGCTC GCCGACGCCT ACTTCATCGG CAGGACCCTC TACCCCGAGC GGTTCGCCGA CATCGACCCC GAGGAGAAGG CAGACGAGAT TTACACCTTC TTCATCGGGA AGCCGGTCTT TTCCGACCTG AACAGCCAGT ACAGGGACCT CGGATTCGCG GAAATCCCGT TGTAA
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Protein sequence | MYSPKYTGMF TAAVLAALVL AMFAAGCTGT GTVQGGTGET VTVTDGFGRT VAVPSPPESV VCSGSGCLRY LVYLQSQDLA VGVDDIEKEE RTIEGRPYSL AYGSQFKDLP LIGEFRGKDD PEKILGIGPQ VVFKTGSTGT AYATSAGDAD KLQERTGIPV VAFPYGSLRN DAEKAEMYTG LRTMGGVLDK QDRAEEVIAY IEATIADLKA RTADIPEAER KTAYIGGVSS AGAHGIISTE PAYPPFHWVN AKNAAAGLGT AHADVAKEAL VDWNPGYIFV DVGTIQMESD GAIGELKSDP ALQGLSAAKE GRVYGVLPYN FYSTNYETVL ADAYFIGRTL YPERFADIDP EEKADEIYTF FIGKPVFSDL NSQYRDLGFA EIPL
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