| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2266 |
|---|
| Symbol | |
|---|
| ID | 4847485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2254114 |
|---|
| End bp | 2254677 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640116976 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001048171 |
|---|
| Protein GI | 126180206 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGG AAGCATTACT GGTCATCGAT GTCCAGAACG AATATTTCTC CGGCAATCTG
CCGATAACAT ACCCGAAGGC GAGCCTGACC AGCATCCTTC AGGCGATGGA CGCCGCACGT
GCTGCAGATG TCCCGGTCGT GGTGATCCGG CACACCAGCA CCGTTCCGGA TGCCCCGTCG
TTCCGGTCCG GAACCCCGGC ATGGGAACTC CATCCCGAAG TGAAGAAGCG GCCGTATGAC
CTGCTCATCG AGAAGGCTCT GCCGGGGAGC TTCACCGATA CCGGCCTTGA TGCCTGGCTT
AGAGAACATT CCGTCAGTTC CGTGACCATC TCCGGCTACA TGTCCCAGAT GTGCTGTGAT
TCGACCGCCC GGCAGGCATT CCATAACGGG TACGGCGTGA AATTCCTCTC GGATGCCACC
GGGACGCTCT CCGTTACCAA CCGGGCCGGG ACGATCTCCG ATGCCGACCT TCACCGGGCA
GTCCTCGTGA CCCAGCAGAT GCGATTCTCG CAGGTGATGA CGACCGCAGA ATGGATCCGG
TCGCTGGAAA TTGCGTATGG GTAG
|
|---|
| Protein sequence | MMKEALLVID VQNEYFSGNL PITYPKASLT SILQAMDAAR AADVPVVVIR HTSTVPDAPS
FRSGTPAWEL HPEVKKRPYD LLIEKALPGS FTDTGLDAWL REHSVSSVTI SGYMSQMCCD
STARQAFHNG YGVKFLSDAT GTLSVTNRAG TISDADLHRA VLVTQQMRFS QVMTTAEWIR
SLEIAYG
|
|---|
| |