Gene Memar_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2219 
Symbol 
ID4848344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2211994 
End bp2213154 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content68% 
IMG OID640116927 
Productexonuclease-like protein 
Protein accessionYP_001048124 
Protein GI126180159 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCGG AGTGCAAACC CTCTGCCGGA AGAATGGTTC GCGCGTTTAA CCTGAGAGGG 
AGGTACGCCC CGGGCATCCG GTCGCCGTTC ATCAGCCGTT CCGGCGACGA GGAAGCCCGG
AGGCTCCGGG ACGACCTCGT CGCCGGATAC CGGGGCCGGG CGCTTGAAGA CGTCTTTTGC
GGCCGTGAAA CGGTGTGCCT TTCCGGGACG TGCTACGTCA TCGAGTCCGA AAGCCCCATG
AGCCTCGATG CCCGGGACCC CGACCGGGCG GCAGCGGCCC TCCTCGGCGA CCTCACCCTG
GTCCGCGGCA TAGGCGAAGC GACCCGGCGG CGGCTGGAGG GACGGGGCTG CCGGTCGGTC
GCCGATCTTA TGAGGCACCC TCGCTACCGC CGTGATGCCG CACGGCTCCT CGATTCGATA
GCGGAAGGGG ACGCCCGCGA TCTCGTGGGA GAGATCGAGC GGCGGCGGCG AAGGAGCGAT
CCGCTCCTCC TCGAGGCCAG CCGGCTCCAC GCACCCGAAG ATTTCGTCTT TCTCGACATC
GAGACGCTGG GGCTCTTTTC ACGGCCGATC ATCCTCATCG GCCTCGCCAG GGTAAGCGGC
GGGTCGATCG CCGTCCGCCA GTATCTCTCG AGGTCGGCCG AAGAAGAGGG AGCGGCGCTC
GCCGCCGTCC TGCCCGACCT GGAGGCGGAG GGCTCGGCCC TCGTCACCTT CAACGGCCGG
GCGTTCGACG TCCCCTACAT CCGGGATAGG CTCGCCTGCC ACGGCATCCC GGCAGACCTC
GCCGTTCCTC ACTTCGACGT TCTCCACTTC GCACGCCGGC GGTGGAGGGG ATCGCTCCCC
TCCTGCAGGC TTGGTGCGCT CGAGACGGGG GTTCTCGGCG TCGCCCGGGC GGACGACGTC
CCGAGCCGGA TGGTGCCGGA GTTCTACGAG ACCTACCGCC GGACCGGAAG TCCCGGGCCG
CTTGTCCCGG TCGTGGAACA TAACCGGCAG GATATCGTCT CGCTTGCCCG GCTCTTCGCG
CTTCTCCGGG GAGATGACGG GGGCGGTGCG GCACCGTGCC GGTCCCCGCC GGGAAGGGGC
GGGGGGACGG AAAATATCAA GACCGATCCG GAGGGTGATG AAAAAATACT TCCTCCATAC
CGCGCACATC CCGAAAAGTG A
 
Protein sequence
MRAECKPSAG RMVRAFNLRG RYAPGIRSPF ISRSGDEEAR RLRDDLVAGY RGRALEDVFC 
GRETVCLSGT CYVIESESPM SLDARDPDRA AAALLGDLTL VRGIGEATRR RLEGRGCRSV
ADLMRHPRYR RDAARLLDSI AEGDARDLVG EIERRRRRSD PLLLEASRLH APEDFVFLDI
ETLGLFSRPI ILIGLARVSG GSIAVRQYLS RSAEEEGAAL AAVLPDLEAE GSALVTFNGR
AFDVPYIRDR LACHGIPADL AVPHFDVLHF ARRRWRGSLP SCRLGALETG VLGVARADDV
PSRMVPEFYE TYRRTGSPGP LVPVVEHNRQ DIVSLARLFA LLRGDDGGGA APCRSPPGRG
GGTENIKTDP EGDEKILPPY RAHPEK