| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2216 |
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| Symbol | |
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| ID | 4848347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 2208517 |
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| End bp | 2210775 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640116924 |
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| Product | putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB |
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| Protein accession | YP_001048121 |
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| Protein GI | 126180156 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase
[COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR02398] glucosylglycerol-phosphate synthase
[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGT TACTGATAGT CTCAAACAGG CTTCCGATCA GCGTATCCCG CAAAAACGGC
GATCTCCGTC TCCAGCGGAG CGTCGGCGGC CTTGCCACCG GGGTCGGTTC GTTTTACAAA
TCCTACGAGA GCCTCTGGGT CGGCTGGCCC GGGATAAACA TCCAGAAGCA GCAGAACGAA
GAGAAAGAGA GGATCGTCGA TGTGCTCAGA AAAGAGCAGT GCCATCCGGT CTTCCTTTCC
CCGTACGATA TCCGGCACTA CTACGACGGG TTCTGCAACA ACACCCTCTG GCCGCTCCTC
CACTACTTCA ACCTCCATGC AGAGTACGAC CCGAAGACGT GGCAGGTCTA CCAGCGGGTG
AACGAGAAGT TCTGCGACGC CGTGATGGAG GTGGCCCGGC CCGACGACAC CATCTGGGTC
CACGACTATC ACCTGATGCT CCTCCCGCAG ATGCTCCGGG AGCGTCTCCC CGATGCCGAG
ATCGGCTACT TCCACCACAT CCCCTTCCCG TCGTTCGAGG TCTTCCGGCA CCTGCCCTGG
AGGGAAGAGA TCCTCTCCGG CCTCCTTGGA GCGGACCTCA TCGGGTTCCA TACCTATGGC
TACGTCCGCC ATTTCCTCTC CAGCGTCCGG CGTCTCCTCG GCTACGAGCA TACCTTCGGG
GAGGTCAGAA CCGGCACGCG GGTGGTGCGA ACCGACCTCT TCCCGATGGG GATCGATTAC
CACCGGTTTG CCGACTCCGC GGGCAGTGCC CCCGTCCAGA AGGAGATAAC CCGGATCCGG
CAGATGTACG GGAAGCGCAA GATCATCCTC TCCTTCGATC GTATGGACTA CACGAAGGGT
ATCCCGCTCC GGCTCGAGGC GTTCGACGCG CTCCTCGAGA AGAAGCCGGA TTACCAGGGC
AAGGTCTCCC TCGTCCTCGT CGCCGTCCCG TCCAGGACCG GCGTCAGGAG TTACCAGACG
TTGAAGAAAC GGATCGACGA GCTCGTCGGC CGGATCAACG GGAAGTACGG GACGACCGAC
TGGGTTCCGG TCCGCTACTT CTACAACTTC CTCCCGTTCG AGACGCTGGT GGCGTTCTAC
AGCGCCGCCG ATGTCGCCCT GGTGACGCCG CTCCGGGACG GCATGAACCT GATGGCAAAA
GAGTACGTCG CCACGAGAAC CGACGGCACG GGCGTCCTCA TCCTCTCCGA GATGGCGGGT
GCGGCCGAGG AACTCGGCGA AGCGATCATC GTCAACCCGA ACGACCGGGA CGCGGTGATC
GAGGCGATCG AGACGGCGCT CGCCATGCCG GAGAAGGAGC AGATCGAGCG GAACCGGACG
ATGCAGAGGA GGTTGATGCG CTACGACATC GAGCACTGGG TCGGCGACTT CCTCACACGC
CTCGGCGACG CCCGGACGGT CCGGGTCGAA CGCTCCGAAC AGATCGTCAC CCCCGCCATC
AGGGACGAGC TGGTCTCCGA CTACGCTGCC GGCAAGGGCC GGCTCCTCCT CCTCGACTAC
GACGGCACCC TGGTGCCGTT CGCCGCAAGG CCGCAGAAGG CGGTTCCCGG CGACGCAACC
CGGGAGGTGC TCAAGTCTCT CTCCCGGACG CCCGGAAACG AGGTGGTGGT GATCAGCGGC
AGGGACCGGT CCACGCTGGA CAACTGGTTC GGGGAGCTGG ATATCGGGAT CATCGCCGAG
CACGGCGTCT GGGTGAAAGA GCGCTCCGGG GAGTGGCGGA TGCCCGAGCC CCTCTCGGAC
GAGTGGAAAG GGGAGATCTA CCCGCTCCTC GAACTCTACA CGGATCGCAC GCCCGGCGCC
TTCATCGAGG AGAAGGACTA CTCTCTCGTC TGGCACTACC GGAGAACCGA TCCGCTGCTC
GGGGCGCAAC GGGCGAAAGA TCTCAAAGAC GACCTGCTGC ACCTGACTTC CAACCTCAAC
GTCGGCGTCA TGGACGGGAA CAAGGTCATC GAGATCAAGA ACAATGTCGT CAACAAGGGC
AGAGCAGCGC TGAACTGGGT CTCCCGGCAC GCCTGGGAAT TCATCCTCGC CATCGGAGAC
GACAGGACCG ACGAAGATCT CTTCGAGGCG ATGCCGCCGG ACGCCTACTC GATCAAGGTC
GGACTTGCCC CGAGCAGGGC CAGATTCAAC CTGGTTGCCC AGCGGGACGT GCTGCCCCTG
CTCCGGAGGT GCATCGAGTG CGATAAGAAA GGCGTTTCCG GGAAAAAAGA GAGGCCGGGG
CGAGAGAAGG GCCTTATCGA GTCGGCTGCT CCGGGATGA
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| Protein sequence | MKRLLIVSNR LPISVSRKNG DLRLQRSVGG LATGVGSFYK SYESLWVGWP GINIQKQQNE
EKERIVDVLR KEQCHPVFLS PYDIRHYYDG FCNNTLWPLL HYFNLHAEYD PKTWQVYQRV
NEKFCDAVME VARPDDTIWV HDYHLMLLPQ MLRERLPDAE IGYFHHIPFP SFEVFRHLPW
REEILSGLLG ADLIGFHTYG YVRHFLSSVR RLLGYEHTFG EVRTGTRVVR TDLFPMGIDY
HRFADSAGSA PVQKEITRIR QMYGKRKIIL SFDRMDYTKG IPLRLEAFDA LLEKKPDYQG
KVSLVLVAVP SRTGVRSYQT LKKRIDELVG RINGKYGTTD WVPVRYFYNF LPFETLVAFY
SAADVALVTP LRDGMNLMAK EYVATRTDGT GVLILSEMAG AAEELGEAII VNPNDRDAVI
EAIETALAMP EKEQIERNRT MQRRLMRYDI EHWVGDFLTR LGDARTVRVE RSEQIVTPAI
RDELVSDYAA GKGRLLLLDY DGTLVPFAAR PQKAVPGDAT REVLKSLSRT PGNEVVVISG
RDRSTLDNWF GELDIGIIAE HGVWVKERSG EWRMPEPLSD EWKGEIYPLL ELYTDRTPGA
FIEEKDYSLV WHYRRTDPLL GAQRAKDLKD DLLHLTSNLN VGVMDGNKVI EIKNNVVNKG
RAALNWVSRH AWEFILAIGD DRTDEDLFEA MPPDAYSIKV GLAPSRARFN LVAQRDVLPL
LRRCIECDKK GVSGKKERPG REKGLIESAA PG
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