| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2180 |
|---|
| Symbol | |
|---|
| ID | 4847375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 2174589 |
|---|
| End bp | 2176922 |
|---|
| Gene Length | 2334 bp |
|---|
| Protein Length | 777 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640116888 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_001048085 |
|---|
| Protein GI | 126180120 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.520189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAACAG ACCTTGCCAA AGCACTTAAA GCAACAGGCT ATGCAGATGC CGAGATTCCT
CCCCTGATGG AGTCATTCCC TCCCGCCGTC ACCGAGTACC TGCGGGATTT CCGACTGCAG
GAGGTTCGCG ACATCGTCGA GACACTTCTC TACATCTACA TCGCCCAGAA CAGCGCGTCG
TCCCGGGGAG AAGGGGCGGG GGTGGTCGAA CAGAGTTGTT ACGCCTACAC GTCCGGGCCG
CTCTTTGCGC TCAGGCAGGT CGGCCTCATC GAGTCCGCCT CCTGGCACGG CACGACGGTG
TTAACGGCGA CTTCTACCGG CGAGGCGATA GCCCGGCCGC TGATGGAGGC ACGGCTCCGG
GCGCTGGACA TCGAGAGTCT CGCCCGCGAG ATCCACGAGA TCGTCCCGGC ACTTCTCGCA
GGGACCGTGA AGGGGTCGTT CGTCAACAAG ACCTTCCCAT CCACGCTCCC CCGCACCGAA
GAGACGTTCA TCAGTTTCCT CCTCAACAAC AGTCCGGGCC TTTTTCTCGA GTGCGAACGG
TTCGCCTCCC GGCTCAGGGC CGCCGGGTGC GCGGTTCTCG CCTACGCCTA CGATCTCGAC
GGTGCAAAGG CCGACGGCGT CGTCTACACC TTCCCGCCGG AGTTCGCGTA CATCCTCAAG
GGGGTGCTCG AACAGATCGA TCCGGCGATC AGGGAGCACT ACGACATGCT CCTCGAGTCG
TTCTACTCGA CGTTCACCGT TCTGCGCTAC CTTGCCTGCG GCGAGGACTA CGACCGTATC
CGCGCATCGC CTGCCCACCG CCGCGAACTC GCGAGGGTGC TCTCGGAACT CGACGACGCG
ATCTACGTCC TCGAGGGGGT GCGCGAGGAG GACGGGGTCG ACCTCGCCCG GTTCATCGTC
AAGGACCGCA ACCTCTACGA TACGCTTCTG CGCGACCTTG AACAGGCGCT GATGGCCGAG
ATCGCCGAGA AGATCGTCAT CGATGGTTCC GCCCCGGCAG CGGAGCCTTC CTCCCCCACC
CCGGAGGAAC CGTCTCCCGC CGCGGAAGAG ATCCCGGTCG GAACACCCGC GGCCGAGGAG
GAGTGGGAAG AGTTCGTCTT CCCCGACGAA GAGGAGGAAG AGGAGATGGA GGAACCGCTC
CCGATCACGC CGCCGCCCGC ACGCCGGCGT GCCGCCCCGT CCCCCGGCCC TTCCTCAAAT
GCCGTCTTTG TGGAACGCCG TTCCCCCGAA CCGTCACACG TCCCGGCAGG AGCACCCCGG
TCGGGGGGGT TCGACATCTT CCTCGGGCAT GCGCAGGACG GGCAGCAGGT CAACTGGTCG
CCCGGCCAGC TCAACAACGG CCACATGATC ATCCTCGGCG GTTCGGGCGC CGGCAAGACC
GAGACGATCC GGTGCGTCGC CTCAGAGCTC GCGGCAAAGG AGATGCCGGT CGTCCTGATC
GATTTCCACG GGGACATGGC CGCAAGCGAC GGGGATATCC GGTCGTACAA GATCCGCGAG
GGCGGTGAGT ACTACTTCAA CCCGCTGGAA CTCGACCCCG ATATCGACGA GATCACCCCG
CTCCGGGCGA CCTCGGACTT CGTCGACGCC ATCTCGATCA ACTTCCCGAC GCTCGGCATC
CAGCAGCGCC GGAAGATCAA GAACATCATC AAGGACTGCT ACCGGATGTC CGGGATCACG
GGGAAGACCG AGACCTGGAC ACGGGTGCTC GACTTCGACG ACATCGAGGG CGAGATCATG
AACTGCGAGG ACGAAGCAAT ACCGGCCTAC CTCGAGGACA TCTTCGACTA CAAGCTCTTC
TCGGGGGAGG AGAAGATCTC GATCCCCACG ATCCTCTCCG GCGGGATCAC CCATATCAAC
TTAAACGCTC TCCCGGAGAA CCTGCGCTAC CTCTTCGCGG ACCTCTTCCT CCGGCGGATC
TACTATACCC TCCAGGCGAC GGGCGAGATC CCGCGCGGAA CGGAGGACGA GCGGGCGAAG
TTCCGGCTCT TCGTGATTGT CGACGAGGCG AAACTCCTGG TGAGCCAGAA GAGCGGTTCG
AAGTCCTCGA TCAAGGCGGT CTTGAACAAG TACGCGACCG AGATGCGGAA ATTCGGGGTC
TCGCTGATCC TCGCGTCGCA GCTGATCGCC CACTTCAACG AGGAGATCCT TGCAAACATC
GCCGTGAAGT TCTGTATGCG CTCCGAGAAC AAAAAGCAGG CCCAGGAAAA CGCCAAGTTC
TTCGAGGTGA GCGAGAAGGA TCTTCTCAAC TTCCAGCCGG GAGAGGGGAT CCTGATCATC
GGTTCGGAGA AGATGAACGT CCGGATCGTC CCGACATCCG GCCGGAAGCC CTGA
|
|---|
| Protein sequence | MSTDLAKALK ATGYADAEIP PLMESFPPAV TEYLRDFRLQ EVRDIVETLL YIYIAQNSAS
SRGEGAGVVE QSCYAYTSGP LFALRQVGLI ESASWHGTTV LTATSTGEAI ARPLMEARLR
ALDIESLARE IHEIVPALLA GTVKGSFVNK TFPSTLPRTE ETFISFLLNN SPGLFLECER
FASRLRAAGC AVLAYAYDLD GAKADGVVYT FPPEFAYILK GVLEQIDPAI REHYDMLLES
FYSTFTVLRY LACGEDYDRI RASPAHRREL ARVLSELDDA IYVLEGVREE DGVDLARFIV
KDRNLYDTLL RDLEQALMAE IAEKIVIDGS APAAEPSSPT PEEPSPAAEE IPVGTPAAEE
EWEEFVFPDE EEEEEMEEPL PITPPPARRR AAPSPGPSSN AVFVERRSPE PSHVPAGAPR
SGGFDIFLGH AQDGQQVNWS PGQLNNGHMI ILGGSGAGKT ETIRCVASEL AAKEMPVVLI
DFHGDMAASD GDIRSYKIRE GGEYYFNPLE LDPDIDEITP LRATSDFVDA ISINFPTLGI
QQRRKIKNII KDCYRMSGIT GKTETWTRVL DFDDIEGEIM NCEDEAIPAY LEDIFDYKLF
SGEEKISIPT ILSGGITHIN LNALPENLRY LFADLFLRRI YYTLQATGEI PRGTEDERAK
FRLFVIVDEA KLLVSQKSGS KSSIKAVLNK YATEMRKFGV SLILASQLIA HFNEEILANI
AVKFCMRSEN KKQAQENAKF FEVSEKDLLN FQPGEGILII GSEKMNVRIV PTSGRKP
|
|---|
| |