Gene Memar_2159 details

Gene Information

• Locus tag: Memar_2159
• ID: 4845992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 2154733
• End bp: 2155407
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640116867
• Product: DNA repair and recombination protein RadB
• Protein accession: YP_001048064
• Protein GI: 126180099
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02237] DNA repair and recombination protein RadB

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACCG ACCGGGTCAG TACGGGAAGC ACGGCGTTCG ACGACCTGCT CGGCGGCGGG 
CTCGAACGCC GGGCGATCAC CCAGATCTAC GGCGAGCCCG CGAGCGGCAA GAGCACCCTC 
TGCCTGATGG CGGCGGTGGC CACCCTCCGG GCCGGGAACT CGGTGGTCTA CATCGACACC 
GAAGGGTTCT CGGTGGAGCG CTTTACGCAG ATCGCCGGGG AGAACGCCGG GACACTCGCC 
GACCGGCTCT ACCTCTTCGA ACCGCTCGAC TTCGCCCAGC AGGGGACGAT GATCGCCGAT 
GCGGAAGGGC TGCTCAAGAA CGGCCACGCC CCCGTGGGGC TGCTGGTGAT GGACTCGGCC 
ACCGCCCTCT ACCGGACGGA ACTCGATCTC GGGCGGGAGG CGATACGGAA ACTCTCGCAC 
CACATGATCA AACTCCTCGG GCTCGCAAAG AAATACGACA TCCCCGTCCT GATCACGAAC 
CAGATCTATA TGGATGTGGA GCGGGACCGG GTGGCGGGGC TCGGGGGGAC GGCGCTCGAG 
CATCTCTCGA AGGCCATCAT ACGGCTTGAA AAGAAGGATA GTGCCCGGCG GGCGATGCTC 
CGGAAGCACC GGTCCCGGCC GGAAGGGCTC TCGTTCGACT TCACGATCAC CGAAGACGGG 
ATCAGAACGG TATAA 

 

Protein sequence

MKTDRVSTGS TAFDDLLGGG LERRAITQIY GEPASGKSTL CLMAAVATLR AGNSVVYIDT 
EGFSVERFTQ IAGENAGTLA DRLYLFEPLD FAQQGTMIAD AEGLLKNGHA PVGLLVMDSA 
TALYRTELDL GREAIRKLSH HMIKLLGLAK KYDIPVLITN QIYMDVERDR VAGLGGTALE 
HLSKAIIRLE KKDSARRAML RKHRSRPEGL SFDFTITEDG IRTV