| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2158 |
|---|
| Symbol | |
|---|
| ID | 4847048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2153543 |
|---|
| End bp | 2154736 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640116866 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001048063 |
|---|
| Protein GI | 126180098 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1641] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00299] conserved hypothetical protein TIGR00299 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATAC TTCTCTTCGA TCCGTTCAAC GGAGCCGCAG GCGACATGAT CATCGGAACC
CTTCTCGATC TGGGAGCCGA TGAGGGGCTT GTCAGGGCAG CCATGCGTTC CGTCGTCGGG
GAACCGACAA TCGAACGGGT AGACCGCTCC GGGATCCGGG CCGTCCAGGT GAGAGCGCAT
GCCCCGGTGC ACCACCGTAG CCTCGACGAG GTGCTCGACC GGGTGGCCGA GAGCGACGCT
CCCGCCCCGG CTCAAGAGAT GGCGCGGCGG GTCTTTCTCC GGATACACCG GGCCGAGGAG
AGTATCCACG GAGAGGGGGC GCACTTCCAC GAGGTGGGTG CGGACGATGC GATCGCCGAC
GTGGTGGGGG CCTGCACCGC CCTTCACTCC CTCGCCCCCG ACGGGGTCGC CGTCCACCCG
CTCGCCCTCG GCCGGGGGTT TGCAGTCGGC GCCCACGGCA CCTTCCCCGT CCCTGCACCG
GCGACCGTGG CAATCCTCGC GGAATCGGAT CTCACGACAG TCTCCGGAGA CGAGGAGCGG
GAACTCTGCA CCCCGACGGG AGCCGCGCTC CTCGCCGAGT TCTCGACCGT CCGGCCCGAA
GACCTCGGCC CGACGGAGAT CAGGGCGGTC GGCTACGGGG CGGGGAGCAG GAACCCACCG
GGAAGGCCGA ACGTCCTCCG GTCGATGCTC CTCTCTACAA AAGATGCCCC GGGAGGCGAC
CGGGTGGACA TCCTCGAGAC GAACGTCGAC GACGTCACCG GCGAAGCCCT CGCCTACGCG
ATCGGCTGCC TGATGGAAGA AGGGGCACGG GACGCGAGCG TTACTCCCGT CGTGATGAAG
AAGGGGCGGA GCGGTCACCT CGTCCGGGTG ATCTGCCGCC CTGACGCGAC CGACCGCCTC
ACGGGAGTGA TGGCGCGGGA ACTCGGGACG CTCGGGATAC GGTGCATCCC GATGGTGCAC
CGGGCCGTCG CGGAACGGAC CATCGAACCG GTCACGGTGA CCGTGCGGGG GAAGGAGACG
ACGATAGACG TGAAGTGCGG CTGGTCGGGC GGGAAGATCG TCTCGTTCAA GGCCGAGTAC
GAACAGGCGG CGGCGTGCGC ACGGGAGACC GGACTCCCGT TCCGCGAGGT CGCCGGGACG
GTCGAGGCGG CAGCACGCCG GATCTTCGTC GAGCGGGGTG TGCTCGAACC ATGA
|
|---|
| Protein sequence | MIILLFDPFN GAAGDMIIGT LLDLGADEGL VRAAMRSVVG EPTIERVDRS GIRAVQVRAH
APVHHRSLDE VLDRVAESDA PAPAQEMARR VFLRIHRAEE SIHGEGAHFH EVGADDAIAD
VVGACTALHS LAPDGVAVHP LALGRGFAVG AHGTFPVPAP ATVAILAESD LTTVSGDEER
ELCTPTGAAL LAEFSTVRPE DLGPTEIRAV GYGAGSRNPP GRPNVLRSML LSTKDAPGGD
RVDILETNVD DVTGEALAYA IGCLMEEGAR DASVTPVVMK KGRSGHLVRV ICRPDATDRL
TGVMARELGT LGIRCIPMVH RAVAERTIEP VTVTVRGKET TIDVKCGWSG GKIVSFKAEY
EQAAACARET GLPFREVAGT VEAAARRIFV ERGVLEP
|
|---|
| |