| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2157 |
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| Symbol | |
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| ID | 4847147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 2151079 |
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| End bp | 2153496 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640116865 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001048062 |
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| Protein GI | 126180097 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAGA TATACTTGAA GGTAGATAGC GCTTATCCGG AGGATCAGGG GGCAGGCAAG
GCACGGCTTG ACCCTGATAC CATGTTGCAG CTCAGGCTCA ACCCGGGAGA CCTCGTCGCT
ATCGAAGGAA AGCGTCGCAC CGTAGCCAAG GTCTGGCGCG CCATGGTGAA CGACTGGCAC
CAGAGCAAGG TCCGGATCGA TAATTTTACC CGGCTCAATA CCGGTGCGAG CATAGGCGAC
AGGGTCAAGA TACGAACGCT CGATGAGGAG GCCGAGGCGA AACTGGTCGT GCTCGCGCCG
CCCGAAGACC TCCCCAAACA GCTCCCCATC AACTACGGCA GCGTCGTCAA CAAACTGATC
GACTTTCCTG TCGTGAAGAA TGACTCCGTT CCCATTCAGG CCGGGCTCCC GTTCATGCAG
CCCCAGCTCG TCGCGTTCAA GGCGGTGGTG GTCGAGCCGG AGAACGCCGT GATCATCACC
AAGAACACGA AGATCGAGTT CTCCGAGAAG CCTGCGGCCG GATTCGAGGG CGTCAAAAGG
ATCAGCTACG AGGATATCGG CGGTCTCAAG GGCGAGCTGC AGCGTGTCCG CGAGACGATC
GAACTCCCCA TGCGGCACCC GGAGATCTTT AGAAAGCTCG GGATCGAGCC GCCGAAGGGC
GTCCTCCTCT ACGGCCCGCC GGGCACGGGT AAGACCCTCA TCGCAAAGGC CGTCGCGAGC
GAGAGCGGCG CTCACTTCAT CTCGATCGCG GGGCCTGAGG TCATCTCGAA GTACTACGGC
GAGAGCGAGC AGCGGCTCCG TGAGGTCTTT GAGGATGCAC GGCAGCACGC TCCCGCGATC
ATCTTCATCG ACGAGCTCGA CTCGATCGCT CCCCGGCGGG AAGAGGTGAC CGGGGAGGTC
GAGCGGCGCG TGGTCGCCCA GCTCCTCACG ATGATGGACG GGCTCGAGGA ACGGGGGCAG
GTCGTGGTGA TCGGGGCCAC GAACCGGCTC GACGCCATCG ACCCTGCGCT GCGCCGTCCC
GGCCGGTTCG ACCGGGAGAT TGAGATCGGC GTTCCGGCGG AGGACGACCG GACCCAGGTG
CTCCACATCC ACACCCGTGG CATGCCGCTT GCCGACGACG TGGCGATTGC CGACGTCGCC
CAGCAGACCC ATGGGTTCGT CGGGGCGGAT CTCGCCGCCC TGGCCCGTGA GGCGGCGATC
AAGGCGTTGC GGCGCTACCT GCCCGAGATC GACCTCGAAG CTGAGGAGAT CCCTCCCGAG
ATCCTCGAGA GGATGGAGGT GCAGGCCAGG GACTTCCGCG ACGCCCTCCG CGACGTGGGC
CCGAGCGCCA TGCGGGAGGT TCTCCTCGAG GTGCCCCACA CCACCTGGGG AGACGTGGGA
GGACTCGAAG AGGCGAAACA GGATATCCGC GAGGCGGTGG AATATCCGCT CACCGAGCGC
GAGCGGTTCG AGAACCTCGG TATCGAGCCG CCGAAGGGTG TCCTCCTCTA CGGCCCGCCG
GGCACGGGTA AGACCCTCAT CGCAAAGGCG GTCGCGAGCG AGAGCGGGGC GAACTTCGTG
CCGGTCAAGG GTCCCCAGCT CCTCTCGAAG TGGGTCGGCG AGAGCGAGCG GGCGGTCCGC
GAGATCTTCA AGAAGGCCCG GCAGGTGGCG CCGTCCATCA TCTTCTTCGA CGAGCTGGAC
GCCCTCGCCC CCGCCCGGGG CGGCGGCACC GAGTCGCACG TGGTCGAGAG CGTGCTAAAC
CAGATCCTCA CCGAGATCGA CGGCCTCGAG GAACTCCGGG GCGTGGTGGT GATGGGCGCG
ACCAACCGGC CGGACATGGT CGACCCGGCG CTGCTCCGGC CCGGACGGTT CGACCGGCTC
GTCTACATCG GCGAGCCCGG GCGGGACGAC CGGGAGAAGA TCCTTTCCAT CCACACCCGC
TACATGCCGC TCGAGGGCTC GACGATGGAA GACCTCGTGG CGATGACGGA AGGGCTCTCG
GAGAACGGTC TCGAGGACCT GGTTCTCGCC GTGGGAGCCA ACCACCACGT GACCGTCGAA
GAAGTGAGGG AGCACCGCGC TGCGATTGAG GCGAGCGACG ACGAAGGGCT CGCAGGCCAC
GTCCGGCGGA AGAAACTCGT CGACCTCCTC GCACAGCAGA AGGTGACCGT CGACGACCCG
GCGAGGGATC AACTCGTCAA GAAGGTGGCG ACCGGCGCCG ACGGGTTCGT CGGCTCGGAC
CTCGAGGCGC TCGCCCGGGA GGCGGCCATG CTCGCCATGC GGGAGGGTGC CGCCGTCGTG
AAGCCGTCGC ACTTCGAGCA GGCACGGGAG AAGGTGCACG CGACGATGAA CGAGCGGCTG
CGGCAGTACT ACGGGAAGGT GCAGCAGCAC TTCAAGGGCG GGCTGCCGAA GGATATCCAG
CCGCCGGAAT ACCAGTGA
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| Protein sequence | MPEIYLKVDS AYPEDQGAGK ARLDPDTMLQ LRLNPGDLVA IEGKRRTVAK VWRAMVNDWH
QSKVRIDNFT RLNTGASIGD RVKIRTLDEE AEAKLVVLAP PEDLPKQLPI NYGSVVNKLI
DFPVVKNDSV PIQAGLPFMQ PQLVAFKAVV VEPENAVIIT KNTKIEFSEK PAAGFEGVKR
ISYEDIGGLK GELQRVRETI ELPMRHPEIF RKLGIEPPKG VLLYGPPGTG KTLIAKAVAS
ESGAHFISIA GPEVISKYYG ESEQRLREVF EDARQHAPAI IFIDELDSIA PRREEVTGEV
ERRVVAQLLT MMDGLEERGQ VVVIGATNRL DAIDPALRRP GRFDREIEIG VPAEDDRTQV
LHIHTRGMPL ADDVAIADVA QQTHGFVGAD LAALAREAAI KALRRYLPEI DLEAEEIPPE
ILERMEVQAR DFRDALRDVG PSAMREVLLE VPHTTWGDVG GLEEAKQDIR EAVEYPLTER
ERFENLGIEP PKGVLLYGPP GTGKTLIAKA VASESGANFV PVKGPQLLSK WVGESERAVR
EIFKKARQVA PSIIFFDELD ALAPARGGGT ESHVVESVLN QILTEIDGLE ELRGVVVMGA
TNRPDMVDPA LLRPGRFDRL VYIGEPGRDD REKILSIHTR YMPLEGSTME DLVAMTEGLS
ENGLEDLVLA VGANHHVTVE EVREHRAAIE ASDDEGLAGH VRRKKLVDLL AQQKVTVDDP
ARDQLVKKVA TGADGFVGSD LEALAREAAM LAMREGAAVV KPSHFEQARE KVHATMNERL
RQYYGKVQQH FKGGLPKDIQ PPEYQ
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