| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2124 |
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| Symbol | |
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| ID | 4847324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 2113145 |
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| End bp | 2117002 |
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| Gene Length | 3858 bp |
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| Protein Length | 1285 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640116832 |
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| Product | DNA polymerase II large subunit |
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| Protein accession | YP_001048029 |
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| Protein GI | 126180064 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
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| TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit
[TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGTCT CGCCTGCTAT CGCCCGGTAC TTCGAGGAAC TCGAGGGAGA GCTCGATGCC
GCGATACGGC TCGCCGCCGC CGCACGCGCC CGGGGACTCG ATCCGAGAAC GGAGATCGAG
ATCCCGGTGG CAAGCGACCT CGCCGACCGC GTGGAGGCGC TCCTCGGCTA CAAGGGGATC
GCGGCCCGGA TACGGGAACT CGAGGCGGAG ATGTCCCGCG AAGAGGCGGC GCTCCGCATC
GGAGACGATT TTGCGGCACG AAAGTTCGGC GAGACCACGC CGGAGGAGAT CCTCGACCAC
GCCATCCGCG CGGCGATGGC GCTCCTGACG GAGGGCGTGG TGGCCGCCCC GACGGAGGGG
ATCGGGAAGG TCAGTCTCGG GAAGAACGAC GACGGGACGG ACTACTTAAA GATCTACTAC
GCGGGCCCCA TCCGGAGCGC CGGCGGGACG GCGCAGGCGC TCTCGGTGCT GGTGGGCGAC
TACGTGCGCC AGGCGCTCGG GATCAACCGC TACATTCCCC GGCCCGAGGA GGTGGAGCGC
TACATCGAGG AGATCCGGCA GTACAACAAC ATCATGAGCC TGCAGTATCT CCCGAGCGAG
AAGGAACTCC GGATGATCAT CGAGAACTGC CCGGTCTGCA TCGACGGCGA GCCGACGGAG
CAGCAGGAGG TGAGCGGCTA CCGGAACCTG GAGCGGGTGG AGACGAACAC CGTCCGGGGC
GGGATGGCGC TCGTCGTCGC GGAAGGGCTG GCGCTGAAGG CCCCGAAAGT CTTAAAAAAC
GTCCGCAAGA TGAAGATGGA GGGCTGGGAC TGGATCGAGG AGATGATCGG CGGCGGCCCG
AAGAGCGATG ACGACGATGC GAGTGCCGCG ATCAAGCCGA AAGACAAGTA CATCCGCGAC
CTGATCGGCG GCCGGCCGGT CTTTTCCTAC CCGATGCGGA AGGGTGGGTT CCGGCTGCGC
CTCGGCCGGG CGCGGAACAC CGGGTTTGCG GCCGCAGGTT TCAACCCGGC GACGCTGCAC
ATCCTCGGCG ACTTCCTCGC GGTCGGGACG CAGATGAAGG TCGAGCGGCC GGGGAAGGCG
GCGGGGGTCG TGCCGGTGGA CTCGATCCAG GGACCGACGG TCAAACTCCG GAGCGGGGAG
GTGCGCCGGG TGGACGACGC GGCGGAGGCC CGGCGGCTTG CCGGGCAGGT GGACGAGATC
CTGGACGTCG GTGAGATGCT GGTCAGTTTT GGGGAGTTCA TGGAGAACAA CCACCCGCTG
ATGCCCCCGG CCTACTGCGA GGAGTGGTGG ATGCTCGAGG GCGGCCCCCG CCACCCGGAG
AACGAACTCG AAGCGATCGA GTTTGCGCTC GACGGGGTTC CGCTCCATCC CGACTACACC
TACATGTGGG ACGACGTCGC CCCGGCCGAT ATCGCCCGCC TCGCGGAAGC GGTCGGCACC
GGCGGGACGG TCGAGGACGG GGTGCTGATG ATCCGAAACA CCCCCGAGAC GAAGGCGATC
CTCGAGGAAC TCCTCATACC CCACCACCTC TCGGGGGACC GGCTGGCGAT CCGCGAGCAT
CTGGCGTTCC TCGCCTGCCT CGGCCTGACG CTGCAGCTTA CGAAGCGGCC GGCGTGGCAG
GACGCGCCGA TGGAGAACTC GCTCGATCTG GTGATGCACC TCTCGGGCTT TACGGTGCGT
TCGCGGGCGG GAACCCGGAT CGGCGGCCGG ATGGGGCGGC CGGGGAAGTC GAAGCCGCGG
GAGATGCGCC CGCCGCCCCA CTCGCTCTTC CCGATCGGCG ACGAGGGCGG TGCCCGCCGG
TCGTTCCAGG CGGCCTGCTC CTCGAAACCC CGGTCGAACA CCGACGGCGG GGTGATCGAG
GCGGAGGTCG GGGAGCGGCA GTGCCCTGCC TGCGGCGCCT TCACCTACAA GAACCTCTGC
GAGTGCGGGG CGCACACGAA CCCGGTCTTC CGGTGCCCGA GGTGCGGCAA GGACGTCGGG
CAGGACGTCT GCCCCCGGTG CAATGCGGAG ACGGTCTGCC TCCAGAAGGT CACGATCAAC
GTGAAAGCGG AGTACCTGGC GGCGATGGAG AGCCTCGGGG TGCGCGAGTC CTCGGTCGCG
CTCTTAAAGG GCGTGAAGGG CCTGATCTCG CGCGAACGGC CGGTGGAGCC GATCGAGAAG
GGGATCCTCC GGGCGTTGCA GAACCTTTAT GTCTTCAAGG ACGGCACCGT CCGCTACGAT
ATGATCGACC TTCCCCTGAC TCATTTCCGG CCGGACGAGG TCGGTGTTCC GATCGAGCGG
CTCCGCGAGC TCGGCTACAC CCACGATACT TACGGCCGGG AACTCGTCTC GGACGACCAG
GTGCTGGAAC TCCGTCACCA GGACATCCTG GTCTCGGAGG GCTGCGGCGA GTGGCTCGTC
CGGGTGGCGA AGTTCGTCGA CGATCTCCTG GTGCGGCTGT ACGGGCTCGA ACCGTTCTAT
AAGGCGGAGA AACCCCTCGA CCTCGTGGGC CACCTCCTGA TGGGGCTTGC CCCGCACACG
AGCGCCGGGG TGCTCGTCCG GTTGATCGGG TTCTCGAAGG CCCCGGTCGG CTACGGCCAC
CCGTTCTTCC ACGCGGCGAA ACGGCGGAAC TGTTTCGCAG GCGATACGGA GATCACCGTC
TCCGACGGGC GGCGGTGGAT GTCGCTGCCG ATCCGGCAGT TCGTGACGGA GAACTTCGAT
ATATCGAAGC CGGGGCTTGA CCACGTGGGG ACGTTCTACT CCGATCCCCG CCAGCCGTTC
TACGTCCGGA GCATCGATTC GCAGGGGAAG ACCAGCCTGA AGAGGGTGAC CTCGGTCTCC
GTCCACCGCG CCCCGGCGCA CCTCGTCCGG TTCGCGACAA GGCGGGGGAG GGTCCTTACG
GTGACGCCCG ATCACGCGAT GCTGGTCTGG GACACGGATT ACCTCCGGAA GATCAAGGCG
CTCGAGGTCG CGGTCGGCGA CCGCGTCCCG GTGGAGGAGG GCGGGCTCGT CGTGGCGGAC
GAGGTCGTCT CCCGCGAGAC GGTGCAGGCG CTCGACGACC GGGTCTACTG CCTGACGGTC
GCCGAGAACC ACACGCTGGT CGCGAACGGT ATCTTCTGCG GGCAGTGCGA CGGCGACGAG
GACTGCGTGA TGCTCCTCCT CGACGGCCTG ATCAACTTCT CCCGCGCCTA CCTCCCCGAG
ACCCGGGGCG GGACGATGGA CGCACCGCTG GTTTTGACGA CCCGGATCGA CCCCTCAGAG
GTCGACAAGG AGAGCCACAA CGTCGACGTC TGCGACCACT ATCCGATCGA GGTCTACAAC
GGCTGTCTCG CCTACGCCCA CCCCAAAGAC CTCGATGCGT TCGTCGACCG GGTGGAGCGG
CGGCTCGGGA CCCCGGCGCA GTGCGAGGGG TTCCTCTTCA CCCACCAGAC ATCGAACATC
TCGGCGGGGC CGCTCGAGTC CACCTACACG AGGCTCGGGT CGATGCTCGA CAAACTCGAG
GCGGAGCTCG ACCTCGCGAA GAGGATCCGG GCGGTGGACG AGGACGACGT CGCCGAGCGG
GTCTTGAACA CCCACTTCAT CCGCGACCTC CAGGGGAACC TCAACGCGTT TTCCAAGCAG
AAAGTCCGGT GCATGAAGTG CAACGCGAAG TACCGCCGGA TGCCGCTCGC GGGGAAGTGC
ACCCGCTGCG GGGGGCACGT CATCCCGACG GTCCACGAGG GCTCGGTGAA GAAGTACCTG
GAGATGTCGC GCAACATCTG CGCAACCTAC GCGATATCGG ACTACACGAA GCAGCGGGTG
GAGGTGCTCT TCATGCAGAT CGAGTCGACC TTCGGCGAGC CCCCGGAGAA GCAACTGGGG
CTCGCGGATT TTATGTGA
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| Protein sequence | MEVSPAIARY FEELEGELDA AIRLAAAARA RGLDPRTEIE IPVASDLADR VEALLGYKGI
AARIRELEAE MSREEAALRI GDDFAARKFG ETTPEEILDH AIRAAMALLT EGVVAAPTEG
IGKVSLGKND DGTDYLKIYY AGPIRSAGGT AQALSVLVGD YVRQALGINR YIPRPEEVER
YIEEIRQYNN IMSLQYLPSE KELRMIIENC PVCIDGEPTE QQEVSGYRNL ERVETNTVRG
GMALVVAEGL ALKAPKVLKN VRKMKMEGWD WIEEMIGGGP KSDDDDASAA IKPKDKYIRD
LIGGRPVFSY PMRKGGFRLR LGRARNTGFA AAGFNPATLH ILGDFLAVGT QMKVERPGKA
AGVVPVDSIQ GPTVKLRSGE VRRVDDAAEA RRLAGQVDEI LDVGEMLVSF GEFMENNHPL
MPPAYCEEWW MLEGGPRHPE NELEAIEFAL DGVPLHPDYT YMWDDVAPAD IARLAEAVGT
GGTVEDGVLM IRNTPETKAI LEELLIPHHL SGDRLAIREH LAFLACLGLT LQLTKRPAWQ
DAPMENSLDL VMHLSGFTVR SRAGTRIGGR MGRPGKSKPR EMRPPPHSLF PIGDEGGARR
SFQAACSSKP RSNTDGGVIE AEVGERQCPA CGAFTYKNLC ECGAHTNPVF RCPRCGKDVG
QDVCPRCNAE TVCLQKVTIN VKAEYLAAME SLGVRESSVA LLKGVKGLIS RERPVEPIEK
GILRALQNLY VFKDGTVRYD MIDLPLTHFR PDEVGVPIER LRELGYTHDT YGRELVSDDQ
VLELRHQDIL VSEGCGEWLV RVAKFVDDLL VRLYGLEPFY KAEKPLDLVG HLLMGLAPHT
SAGVLVRLIG FSKAPVGYGH PFFHAAKRRN CFAGDTEITV SDGRRWMSLP IRQFVTENFD
ISKPGLDHVG TFYSDPRQPF YVRSIDSQGK TSLKRVTSVS VHRAPAHLVR FATRRGRVLT
VTPDHAMLVW DTDYLRKIKA LEVAVGDRVP VEEGGLVVAD EVVSRETVQA LDDRVYCLTV
AENHTLVANG IFCGQCDGDE DCVMLLLDGL INFSRAYLPE TRGGTMDAPL VLTTRIDPSE
VDKESHNVDV CDHYPIEVYN GCLAYAHPKD LDAFVDRVER RLGTPAQCEG FLFTHQTSNI
SAGPLESTYT RLGSMLDKLE AELDLAKRIR AVDEDDVAER VLNTHFIRDL QGNLNAFSKQ
KVRCMKCNAK YRRMPLAGKC TRCGGHVIPT VHEGSVKKYL EMSRNICATY AISDYTKQRV
EVLFMQIEST FGEPPEKQLG LADFM
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