Gene Memar_2117 details

Gene Information

• Locus tag: Memar_2117
• ID: 4845946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 2107836
• End bp: 2108534
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640116826
• Product: hypothetical protein
• Protein accession: YP_001048024
• Protein GI: 126180059
• COG category: [S] Function unknown
• COG ID: [COG4066] Uncharacterized protein conserved in archaea

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCAA TGACAGCAGT TTTCAGCAGA GTGACAGCAA CTGCTGTCAA CGCCCGCCAG 
ATTAATGGAA GATTATCAGT ATACTCATAC TGGAAGGAGT TCGATCCAAT CACGGCAGAG 
GACGAAGCAG GTGCAATCCA TCAAATGGCC CGGCGGATGG CGGCCGCGGT AACAAAGGGA 
GATCTCGGAT TGCTCCTCGC CGAAGAAGTC AGTCGTTACT CGCTCATGGA TCTTCAGATC 
ATCGGGGGGC GGCTGCACGC GGAGATTATC CGGCTGCCCG AACCCTACCG GAAACAGGTG 
CACCCCTTCA TCACCGAGCA GTTATTCGGC GCTCACCACC AGCTTCTCGC CATGCACCGG 
TCGGGCCGGT TCCGGTCCAT GACCGAACCG ATCACTGATC GTGCAACGTT CGTTGAGTTC 
TGCAATATGA TTCCCGATGG ATGCTTCCGG CGGGATGAAT CTCCGGAACG GATCCCGTTT 
CGGAATACAC CCCGACATCG GGCCTTTTAT TACCTGGTCT CGGCATTTAC GATCTTCGTG 
CTCGACCGCC CGGGTCACCC GGTGGGAATG CCGTTCCCGG GAGGGTTCCG GGTCGAAGAG 
CACAATGGGT CTTTTTATTG TCTCATCCGT GACCGCGAAA AGGATGTCCC GTTCTCGATC 
TGCAACTTCT GCCCCGCACT GCAGACCGAG GACGGGTGA 

 

Protein sequence

MTAMTAVFSR VTATAVNARQ INGRLSVYSY WKEFDPITAE DEAGAIHQMA RRMAAAVTKG 
DLGLLLAEEV SRYSLMDLQI IGGRLHAEII RLPEPYRKQV HPFITEQLFG AHHQLLAMHR 
SGRFRSMTEP ITDRATFVEF CNMIPDGCFR RDESPERIPF RNTPRHRAFY YLVSAFTIFV 
LDRPGHPVGM PFPGGFRVEE HNGSFYCLIR DREKDVPFSI CNFCPALQTE DG