Gene Memar_2115 details

Gene Information

• Locus tag: Memar_2115
• ID: 4847778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 2105359
• End bp: 2105976
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640116824
• Product: DNA polymerase beta subunit
• Protein accession: YP_001048022
• Protein GI: 126180057

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAACC CCACCCGGCA ACCCCCGCAC AACAAGACCC CGGAGCCCAC CCCGGCCGGG 
GACCTCCACC CCTGGGACTT CCTGGACGAT TACGGCTCGC TCCTCCGGAA GTCGTCGCTG 
ATCCTCCTCG TCGTCCTCGG AAGGGAATAC ACGAAACAGT TTCACGTCCG GGATCTCTCG 
CGGATGGTGG GGCGCGACGT CTCGCTCGTC AGCAGAAACC TCAAAGACCT GGAGGCGATG 
GGTCTGGTCG CCCGTGAAGA CGTGGGAAAC CTTGCCTTTT ACCAGGCGAG GATGGAGAGC 
GTCCTCCTCC GGCAGACGAA GGTCTGGTTC ACACTCCTGG AACTGCAGCC CCTCGTCCGC 
GACCTGCAGG AGGTGACGAC GAGCGTCATC CTCTACGGCA GCTGTGCACG AGGGGAAGAC 
ACGTCTGCGA GCGATATCGA CCTCTATATC GAGACCGCCG AAAAAGAACC CGTCCGGGAG 
GTGCTGGAAC GGCACCGGGC CGCTCTCTCG CGGGAACTCT CCCCGGTCGT CCATACCCCG 
GACGAAACCT ATCGATTAAA GACTGGGGAT GCCCCATTCT TCGATAGTAT CCGACAGGGG 
ATTGTTCTAA GCGGGTGA 

 

Protein sequence

MDNPTRQPPH NKTPEPTPAG DLHPWDFLDD YGSLLRKSSL ILLVVLGREY TKQFHVRDLS 
RMVGRDVSLV SRNLKDLEAM GLVAREDVGN LAFYQARMES VLLRQTKVWF TLLELQPLVR 
DLQEVTTSVI LYGSCARGED TSASDIDLYI ETAEKEPVRE VLERHRAALS RELSPVVHTP 
DETYRLKTGD APFFDSIRQG IVLSG