Gene Memar_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2113 
Symbol 
ID4846187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2103518 
End bp2104942 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content66% 
IMG OID640116822 
Productdipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein 
Protein accessionYP_001048020 
Protein GI126180055 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACCCG GCAGAACCCT GATAACCACG ATCACCCTTT TCATCGCAAT CCTCTCCGTC 
GTCTTCGCGG GCTGCAGCGC GACGGGCGAG CAGTCGCCAG TATCGCCTCC CGCCACGCCG
GTTGCCGCAC AGGCCTCCGA CTGCCCGGCG CTCGTGTTTA CGGATCGGGA GTTTGCGTTC
GAACTCCAGC GGACACTCGG CGCCTCGTAT TCGGGAGAGG CCGATATCGG CGAGTGCCTT
GCCACTGCGT CCAGGATCAG GGAAGGGGAC TTCGAGAGCT GGTATGGCGA GTGGAAAGCG
ACCGCAGACA ACTTCAGGGC GGCGGGCGAC GAGAGTCTCG CCGCCGGGCA CAGGGTCACC
GCAATGGAAG CGTACTACCG GGCCGCGACG TATTACCGCA CGGCCGAGTT CTTCCTGCAC
GGCAACGCCA CCGACCCCCG CATCGTGGAG ACGTGGGGGA TGAGCCGGGA AATGTTCCGC
AACGCGCTCG CGCTCGACGC CGTCCCCTAC GAGATCGTCG CCATCCCGTA CGAGAATACC
ACGCTGCCGG GCTACTTCTA TGCGGTCGAC GACTCCGGCG AACCCCGGCC GCTGCTCATC
GTCCAGACCG GCTTCGACGG CTGCCAGGAG GAACTCCACC CGTACGCGAT GGAGGGGATC
CGGCGCGGAT ACAACGTCCT GACGTTCGAG GGGCCGGGCC AGGGCGAAGT GATACGGGTT
CAGCAGATCC CGTTCCGCCA CGACTGGGAG AAGGTGATCG GGCCCGTCGT GGACTACGCG
GTGAGCCGGC CCGACGTCGA CGAAGGTCGG ATTGCGCTCT GGGGGATCTC GCTCGGGGGC
TACCTCGCTC CCCGCGGTGC CGCATACGAG CCCCGGATCG CGGCGCTGGT CGCGGACGGG
GGCACCTACG ATGTCGGACA GACGCTCCTC GCGAACCTGG AGGCCGGCGG GGCAGGGAAC
CTGACGGAAG ACGAACTCCG GGAGTGGCTG CAGACGGATC CGGTCGAGTT CAACGACGCC
ATCCGCGACG TCATGGCCCA CGATACCGGC ACCCGATGGC TGAACGAGAA CGGGATGTTC
GTCTTTGATG TCGGGTCGCC GGCGGAGTTC TGGGCGAAGT GGATGGAATT TTCGCTCGCC
GGGGTTGCCG AAGAGATACG CTGCCCCACG CTGGTCTGTG CCGGTGCGGC CGACCACTTC
GACCCGGACG GGGTGCAGGC GAAGGCGCTC TACGACCACC TCACCTGCGA GCGGGAACTT
ATGGTCTTCT CCGACGACTA CGGTGCCGGG TCGCACTGCC AGCTCGGGGC GTTCGCGCAA
TCGTTCGGCG CCAAGTTCGA CTGGCTCGAC GATAGGATGG GGATGGCGGG GACTTCTCCC
GGCGATCACG GGGAAGGCGT CTCGAACCCC TCTCCTGCAA GATAA
 
Protein sequence
MKPGRTLITT ITLFIAILSV VFAGCSATGE QSPVSPPATP VAAQASDCPA LVFTDREFAF 
ELQRTLGASY SGEADIGECL ATASRIREGD FESWYGEWKA TADNFRAAGD ESLAAGHRVT
AMEAYYRAAT YYRTAEFFLH GNATDPRIVE TWGMSREMFR NALALDAVPY EIVAIPYENT
TLPGYFYAVD DSGEPRPLLI VQTGFDGCQE ELHPYAMEGI RRGYNVLTFE GPGQGEVIRV
QQIPFRHDWE KVIGPVVDYA VSRPDVDEGR IALWGISLGG YLAPRGAAYE PRIAALVADG
GTYDVGQTLL ANLEAGGAGN LTEDELREWL QTDPVEFNDA IRDVMAHDTG TRWLNENGMF
VFDVGSPAEF WAKWMEFSLA GVAEEIRCPT LVCAGAADHF DPDGVQAKAL YDHLTCEREL
MVFSDDYGAG SHCQLGAFAQ SFGAKFDWLD DRMGMAGTSP GDHGEGVSNP SPAR