Gene Memar_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2100 
Symbol 
ID4847242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2088442 
End bp2089230 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID640116809 
ProductABC transporter-related protein 
Protein accessionYP_001048007 
Protein GI126180042 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCGGC TCTCGGTCAA TGATCTCTCG TTTGCCTACC GCGACCGGGA GGTGCTCTCC 
GGAATCACCT TCTCGGTGGA CGCGGGCGAG GTCCTCGGGC TCGTGGGGCC GAACGGGTGC
GGGAAGACGA CGCTCATCCG GTGCGTCGAC GGGATGCTCT CCCCCGACGG GGGGAGGGTG
ATGCTTGACG GGCGGGAGCT TCGCACGATG CACCGCCGCG AGGTCGCGCG GGCGATGGCC
TACGTGCCGC AATCGGCCGG GAACGGGACC GCGGCGACGG TCTTCGAGAC CGTCCTGATG
GGGAGGCGGC CCTACCTGAA CTGGACGGTG AACAGGACCG ACGAGGAGAA GGTGGTTGCG
GCGCTCGACC TCCTCGATCT CGGGGATCTC GCGCTCCGCA AAGTCGCCGA ACTCTCGGGC
GGGGAGCGCC AGCGGGTGAT GATCGCCCGG GCGCTCGTGC AGGAAACCGG GGTGATCCTC
CTCGACGAAC CGACGAGCAA CCTGGACGTC TGCCACCAGA TGGGGGTCAT GGAAGTCCTC
CGCGGGCTTG CCGGGGAGAA GCGGCTCGCG GTCGTCATCG CGCTCCACGA CCTGAATCTC
GCCGCCACCT ACTGCCACCG CCTCATGGTG ATGAAGGCCG GGGCGGTCTA CGGCTACGGG
ACGCCGGACG AGGTGCTCAC CGAGGAGATG CTCAGGGAGG TCTACGGGAT CGAGGCGGTG
GTGAAACGGG ACCTTTCGGC GCCATACATG GTCCCTGTCC GGCCGGGGCA CCTGAGGGAG
GGGGCGTGA
 
Protein sequence
MVRLSVNDLS FAYRDREVLS GITFSVDAGE VLGLVGPNGC GKTTLIRCVD GMLSPDGGRV 
MLDGRELRTM HRREVARAMA YVPQSAGNGT AATVFETVLM GRRPYLNWTV NRTDEEKVVA
ALDLLDLGDL ALRKVAELSG GERQRVMIAR ALVQETGVIL LDEPTSNLDV CHQMGVMEVL
RGLAGEKRLA VVIALHDLNL AATYCHRLMV MKAGAVYGYG TPDEVLTEEM LREVYGIEAV
VKRDLSAPYM VPVRPGHLRE GA