| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2099 |
|---|
| Symbol | |
|---|
| ID | 4848125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2087390 |
|---|
| End bp | 2088442 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640116808 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001048006 |
|---|
| Protein GI | 126180041 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGC ACGTCATCAT CCAGGAGGGG TATACCCGGC TGAAGAAGAC CCGCGCCCTC
TTCATCGGCG GTCTTCTTGC CGGCCTCGTC ATCCTCATCG GCATCGCGGT CACGCTCGGG
TCGGCCGGCC TCACCGTGGG TGAGTCCTAC CTCGCGATCC TGGCCGGCCT CTTCCCCGGG
GTATTCAGCG CACCCGACCT CGCGACGACC ATCGTCTGGG ACTTCCGGCT CCACCGGGTG
CTCTTCGCGG TCTGTGCCGG GTTCGGGCTC GCGGTGGCGG GCTCTGTCAT GCAGGGGATC
CTCAGAAACC CGCTCGCAAG CCCCTTCACC CTCGGGATCG CCTCGGCGGC CGCCACCGGC
GCCTCGATCG CCATCGTCCT CGGCGCCGGG GTCGTCGGCG GGGAGTACCT CGTCATCGGC
AACGCCTTCC TCTTCTCTCT GCTGGCGGCG CTCGCCATCT ACGGGATGGC CCGCTACCGG
GGCATCGGTT CCGAGACGAT GGTGCTTGCC GGCATCGCGC TCATGTACCT CTTCTCGGCG
GTGACGTCGC TGCTGCAGTA CGTCGGCAGC GCCGAGCAGC TCCAGGCGGT GGTCTTCTGG
ATGTTCGGCT CGGTGGACAA ATCCACCTGG CCGAAACTCG GCATCGTCGC CCTCGTCCTC
GCCTGCACCA TACCCTACCT CCTCTACCGC GCCTGGGACT TAAACGCCCT CGCGGAAGGA
GATGAGGTGG CCGCCAGCCT CGGGGTTCCC GTCGAGCGGT CGATGACCGT CCTGATGATG
ATCGCCTCCC TGATCACCGC GGTGATCATC TGTTTCACCG GGACGATCGG GTTTATCGGG
CTCGTCGCCC CGCACATCAC CCGCATGGCC ATCGGCAGCG ATTTCCGCAC GCTTCTTCCC
GCTTCGGGCC TCGTGGGGGC TCTCCTCCTT CTTTCTGCCG ACAGCATCGC ACGCAGCGTC
CTTGCTCCGC AGGTCCTTCC CGTCGGGATC GTGACCGCGT TCCTCGGGGT GCCGTTCTTC
ATCTACCTCT TCCTGCACCG GAGGAGTGCC TGA
|
|---|
| Protein sequence | MEQHVIIQEG YTRLKKTRAL FIGGLLAGLV ILIGIAVTLG SAGLTVGESY LAILAGLFPG
VFSAPDLATT IVWDFRLHRV LFAVCAGFGL AVAGSVMQGI LRNPLASPFT LGIASAAATG
ASIAIVLGAG VVGGEYLVIG NAFLFSLLAA LAIYGMARYR GIGSETMVLA GIALMYLFSA
VTSLLQYVGS AEQLQAVVFW MFGSVDKSTW PKLGIVALVL ACTIPYLLYR AWDLNALAEG
DEVAASLGVP VERSMTVLMM IASLITAVII CFTGTIGFIG LVAPHITRMA IGSDFRTLLP
ASGLVGALLL LSADSIARSV LAPQVLPVGI VTAFLGVPFF IYLFLHRRSA
|
|---|
| |