| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2094 |
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| Symbol | |
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| ID | 4847142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 2080857 |
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| End bp | 2082452 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640116803 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001048001 |
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| Protein GI | 126180036 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCGC AAATTCCCGG AACGCCGCCG GCAGGTCGCC GGCTGCTCAC CGTCACGGGC
GCAGTATTGA TCGTTCTTGC CGCGCTCTGC GCTGCGGGCT GCACCGCCAC ATCCCCGGCC
GAGACCGTTA TAGCGTCCGA AGCCGCGAAC GCAACCGAAT TTAAAGAACG GATCGACGCC
GTCATCTCGC AGGAGCGGTA TGATTACGCC ACGTGGGGCA TGATGGCGCG GGACACCTCC
ACCGGCGAGG TGCTGCTCTC GATGAACGGC GACCGTCTCT TCACGCCGGG TTCGACGACG
AAGGTCTTCA CCGTCTCGAC CGCTCTCGAC GTTCTCGGCC CCGACTACCG GTTCAGGACG
CCGGTGTACC GGGTCGGCGA CGATCTGGTG CTGGTGGCCT CGGGCGACCT TGCGATGGGC
GGTCGGGCCG GGCCGAACGG CACCCTTGCG TTCACGAACG AGGATCACGG CGATGCCCGG
GCATTCGGGG ACTGCCTGCT CGTCGACGCC GACCCGCTCG CCGGGCTCGA GAACCTGGCC
GAACAGGTTG CTGCGGCCGG GATCACGGCG GTAGACGACG TAATCGTCGA CGACCGGCTC
TTTTGCGAGA CGCAGATGAT GTCTGAAGGG CTGGTGACGC CGATCGTCGT CAACGACAAC
CTGATCGACG TGACGATCGT TCCCGGGCGC GAGGGAGAGC CGGCGACGGC CGACTGGCGG
CCGCGATCGT CCGCATACAC GATCGAGAGC CGCGTCGTGA CCGGGGCGCC GGGTTCTGAC
CCGGCGGTGG CGATCCCCGC CTACACCGGG CAGGCGTTGA TCGAGGTGAC CGGGACGGTG
CCGGCGGACG CAGGACCGGT CAACCTGACC TCGAACGTGG AGATCCCGGC GGCGTTCGCG
AGAAGCCTCT TCATCGACGC GCTTGAGAAC GCCGGGGTGG CGGTCGTGGC ACCGGCGGCC
GGGGAGAACC CGTCGGGCCG CCTTCCCGAC GAGTACGGGT CGGTCGGGAG AGTCGCCGAA
CTCGTCTCTT TGCCGTTCTC CGAGTACGCG AAGGTGACCC TGAAGGTGAG CCAGAACCTC
TACGCAAACT GCCTGCTCGG GATCATCGCC GCCCACGAGG GCTACGATAC GGTCGAGGCC
GGGCTCTTTG TCGAAGGGGC GTTTCTCGAA GAGATCGGGG TGAACCCCGA CACCCTGCTG
CTTGCCGACG GCGAGGGGAG CATCGTGAAC CGGATCAGCC CCCTCGCGGC GACCGATCTC
GCGGCCTACA TGGCGGGGAC GGACCTGTAT GCCCCGCTCT CCGACGCCCT GCCGGTCCTC
GGCGTGGACG GGACGCTTGC AGCCAATGCC AAGCCGGGAG ACCCGGGTTA CGGTGCGATC
CGTGCCAAGA CCGGAACCTC GGCGGGCGGC GACCAGCAGG GCGGGATCTT CCTCTATACC
CGCGGCCTGC TCGGCTACAT GACGACGGCG AAGGGAACGC CGGTCACGTT TGCGATCTAC
GTCAACAACA TCGCCGGCCT TGCGTCGATG GACGACCTGC AGGGCGTGAC GGACGATGTA
AACGACGTCG CGGTTCTGAT ATACGAGTAT CTCTGA
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| Protein sequence | MDAQIPGTPP AGRRLLTVTG AVLIVLAALC AAGCTATSPA ETVIASEAAN ATEFKERIDA
VISQERYDYA TWGMMARDTS TGEVLLSMNG DRLFTPGSTT KVFTVSTALD VLGPDYRFRT
PVYRVGDDLV LVASGDLAMG GRAGPNGTLA FTNEDHGDAR AFGDCLLVDA DPLAGLENLA
EQVAAAGITA VDDVIVDDRL FCETQMMSEG LVTPIVVNDN LIDVTIVPGR EGEPATADWR
PRSSAYTIES RVVTGAPGSD PAVAIPAYTG QALIEVTGTV PADAGPVNLT SNVEIPAAFA
RSLFIDALEN AGVAVVAPAA GENPSGRLPD EYGSVGRVAE LVSLPFSEYA KVTLKVSQNL
YANCLLGIIA AHEGYDTVEA GLFVEGAFLE EIGVNPDTLL LADGEGSIVN RISPLAATDL
AAYMAGTDLY APLSDALPVL GVDGTLAANA KPGDPGYGAI RAKTGTSAGG DQQGGIFLYT
RGLLGYMTTA KGTPVTFAIY VNNIAGLASM DDLQGVTDDV NDVAVLIYEY L
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