Gene Memar_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2085 
Symbol 
ID4846996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2073277 
End bp2074479 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content62% 
IMG OID640116793 
ProductABC-type transport system involved in multi-copper enzyme maturation permease component-like protein 
Protein accessionYP_001047992 
Protein GI126180027 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACC GGGTACCCGG TCCGAACCGC ACGCTCCTCG TGGCGGGGAA AGAGTTTGCC 
GATCACCTCG CGAGTCGGCG GTTCACCCTT GTCCTCCTCC TCTTCCTGAT CCTCTGTTCC
GTCTCCCTCT ACGAGGGTGT CGAGAAGTAT AGCGAGAAAC TCGCGGCATA CTCCGACGGT
ACCGTGCCGG TGCCGAAATT CCTGGGTTAC CCCGGCTGGA TGCCGGAGAA ACCCTCACTC
CTCGTAGTCT TCCTCAATCT CTCCTCGCAG GTCCTGAGCT ACGGCCCGCT GCTTGCGATC
GCGACCGGGT TCGACCTGAT CACGCGGGAA CGCTGGTCGG GTTCGCTCAA AACCCTCCTT
TCCCGTCCGG TTTTCCGCGA CGAGATCATC ACCGGCAAGG CGCTCGGCGG GTTCGCCGCC
CTGACGCTGG CGATGAGCAT CGCGGTTCTC ATCGCGCTCG CCCTGCTCCT GCTCTTTGCA
ATTGTCCCCT CACCAGCCGA GCTCGGAGCG ATCCTGGTCT TCTGGATTGT TTCGCTGGTG
TACCTCTTCA CGTTCTTCTC GGTCGCTCTC CTCGCCTCGG CGGTCGTTGC CGAGAGCGGG
AGCGCTCTTG TCTGGTCGCT GGTCGCGATC TTCGTCTTCT CCTCCGTCGT ACCGATGGCC
GGTGGCATCC TTACCGATGC GGTTGCCGGA ACGCCGCCGG ATGTGGTGGA TCTTATGAGC
GACCCGCATC CCACCGAGGA GGAGTGGCTG CAGTACCGGG AGGAGGAGCA AGTCTATCTC
GAACAAAAGG AACGTGTCGG AGCGACCATC CGCCTCCTCT CGCCACAAAG GAATTACCAG
GAACTCTCGA TAGCGATCAC CAATCCACGG TTCTCGATGT GGATCAACCC GGACCCCTTC
GCCTTGAGAA CACCCCCCCG GGGAAGAACC GCTCCCCGAC CTTCCCGACC TGATTGCTCT
CATCTGGCAG CCGATCGTCG CGATGCTTGC GTTACCGGCG GTCTTCTTCG GAGCGGCATA
CACCCGTTTC ATACGGATGG ACATCCGGTG ACGGCCGGGC GGTCAGCCCG CCCGGAATGC
ACTCACCCCG CCTGCCGCCG GCATCCGGGG CGAGTGACGG AGTATCTGCA GAACGGGCCA
TATTCCCTGT TCGGAGCCTT CGAGTGCCCG GACGTGTCGA TGATTGGCAC AGAAAAGGTA
TAA
 
Protein sequence
MADRVPGPNR TLLVAGKEFA DHLASRRFTL VLLLFLILCS VSLYEGVEKY SEKLAAYSDG 
TVPVPKFLGY PGWMPEKPSL LVVFLNLSSQ VLSYGPLLAI ATGFDLITRE RWSGSLKTLL
SRPVFRDEII TGKALGGFAA LTLAMSIAVL IALALLLLFA IVPSPAELGA ILVFWIVSLV
YLFTFFSVAL LASAVVAESG SALVWSLVAI FVFSSVVPMA GGILTDAVAG TPPDVVDLMS
DPHPTEEEWL QYREEEQVYL EQKERVGATI RLLSPQRNYQ ELSIAITNPR FSMWINPDPF
ALRTPPRGRT APRPSRPDCS HLAADRRDAC VTGGLLRSGI HPFHTDGHPV TAGRSARPEC
THPACRRHPG RVTEYLQNGP YSLFGAFECP DVSMIGTEKV