Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2068 |
Symbol | |
ID | 4846583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 2059009 |
End bp | 2059866 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640116777 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_001047976 |
Protein GI | 126180011 |
COG category | [S] Function unknown |
COG ID | [COG3398] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCTA TTACTACTGA TGGATGTAGA GGCACTGTAG GGGGCCGGAC CGTGCACAGA GCGGCTGACC TGTTCATTGT CCTGTCCCTG GCCCTGCTCC TCCTCTGGAG TCCTGCGACG GCAAAGATCA TCGTCGAGCC AGGTCCCGCT GAACTCCCCA CTGATGGGAT AAACGTCGAC GACGAGTTCT TCATGCCGCT CTGGTCCTAC CCGCCGATGG AGTTGCTCAC CATTCTCCTC CTCCTCCACT GCCCGCTCCT CGCGATGCCC TTCGAACTCG TCTATTCTAC CGGCGTCACG GCGTACCTCG GCTACCGGTC TTCACGCAGC CTCCTGGACA ACAAGAAACG GTCCCGAATC TATGCCTGCA TCCGGGACCG CCCGGGGATC GCGCCCGCTG AGATTGCCCG CATCACCGGG ATCAACCGGG GAACGATCCG TTACCACCTC TCCTGCCTCC GGGAGGCCGG TCTGGTCAGT GCCCTGAATC GAGACGACAG GGTGGGCTAC TTCCGAAACG GCGACTATGA TACGGCCGAG AAGGTCGTAT GCCTGCACCT CCAGAACGGC ACGCGTCGGC AGATCTTTGC CCTTCTCCTT GAAAAATCCG GCATCACGCA GTCGGAGATA GCCGAGATCG TCGGCATCTC GCGTTCCACA GTCGCCTGGC ATCTGCGTAG GCTCGCCGCA GACGGACTCG TCGAAGCGAA TCGCGACGGC CGGACAGTGT GCTACACGCT CACCGGCGAG GCACTGGCGT CTTCCGGCGT TCTGGACGGG ACAGCGGACA TTACGGTATC TTTCCTTCCC TGGAACGGAA CGGTTGCCGA AAACCGTGCC GACTCACTTC TCCAGTAG
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Protein sequence | MLSITTDGCR GTVGGRTVHR AADLFIVLSL ALLLLWSPAT AKIIVEPGPA ELPTDGINVD DEFFMPLWSY PPMELLTILL LLHCPLLAMP FELVYSTGVT AYLGYRSSRS LLDNKKRSRI YACIRDRPGI APAEIARITG INRGTIRYHL SCLREAGLVS ALNRDDRVGY FRNGDYDTAE KVVCLHLQNG TRRQIFALLL EKSGITQSEI AEIVGISRST VAWHLRRLAA DGLVEANRDG RTVCYTLTGE ALASSGVLDG TADITVSFLP WNGTVAENRA DSLLQ
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