| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2057 |
|---|
| Symbol | |
|---|
| ID | 4847829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 2048018 |
|---|
| End bp | 2049829 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640116766 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_001047965 |
|---|
| Protein GI | 126180000 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.825399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTA TTGCCGGGCA GTTTGCCCTG AACGGGGAGG AGGCGGATGC GGCTCTCGTC
GGGGCGATGG CACAGCGGCT GGCTCATCGC GGGCCCGACG GCGAAGGAAC GTTCTTCTCC
GGGCCGGTCG GCCTCGCCCA TCGCCGCCTC GCGATCATCG ATCTCTCCGA CGAGGGTCGC
CAGCCGATGG GAAACGAGGA CGGATCGCTC CAGATCGTCT TCAACGGCGA GATCTACAAC
TACCGCGAAC TTCGTGAGGA ACTCGCCGCC CTCGGACACC GTTTCGCTTC CGCAACCGAT
ACGGAGGTGA TCCTGCACGC CTACGAGGAG TGGGGGAGGG ACTGCCTCGC CCGGTTCAAC
GGGATGTGGG CGTTCGCCCT CTGGGACGGG CGCCGTCGCG AACTCTTCTG TGCCCGCGAC
CGCCTGGGCG TCAAGCCGTT CTACTACGCC GTGGCCGGGG GGTCGTTCCT CTTCGCCTCG
GAGATCAAGG CGCTCCGGGT GCATCCGCTG GTCGGCCGGC GGCCGAACGA CCGGATGCTC
TCGACGTTCC TTGCGTGGGG AGTTGCGGAT CACACCGGCG AGACGATGTA CGACGGCGTC
TTTCAGGTCC CGCCGGCCCA TGCGGTCGTC GTCTCGGAGG AGGGTGCCGG GGAGCCGGAA
CGCTACTGGG ATTTTTCGAT GAACCCCGCC TCGCGAGAGG CCGGCACTGA CGACGAAACC
GCCGCAAGGA GGGCGAGAGA CCTCCTGACC GATGCCGTCC GGCTCCGGCT CCGGAGCGAC
GTCCCGGTCG GAACCTGTCT CTCGGGCGGC ATCGACTCCT CGACGGTCAC CGCCCTGATC
AACGTCCTCC TGCGGGAAGA GAGCCCGGAG AGCGTCGGTG AGCGGCAGAA GACGTTCTCG
GTCTGTTTTG ACGATCCGAG ATTCGACGAG AGCCGGCATA TCGATACGGT AGTCGCGGCG
ACGGGCGTCG CGAACCGCCG GACGACGCCG GGCACGGACG GGCTCTGGGA GGATATCGAG
AGATTACTCT ATATGCAGGA CGAGCCGTTC GCGTCCCTCT CGATATATGC CCAGTACTGC
GTGATGCGGC TTGCGCGGGA GGAGGTGAAG GTGGTCCTCG ACGGACAGGG CGCCGACGAG
CAACTCGCCG GCTACATCGC CTACCAGGCG CCCTACATCC GCGGGCTCCT CCGGCGCCGG
GAGATCCTCG CCGCTCTCCG GGAGGGGATC GCGAGTGCGA GGCTGCATCG GTCGTTCTTC
GCGTGGGCGG CCGGGCAGTC CCGGGTCCGG TTGGAGCGGC GGGAACTCCT CCGCGGATCA
GCGCCCGAGG TCCTCCGGTA TGCGGGGTCG CTTGACGAGG TGCTGAAACG GGAGGTCACG
GCCTCGAACC TCCCCCTCCT GCTGCACTGG GAGGACAGGA ACTCGATGGC CTTCTCGATC
GAGGCCCGGG TCCCGTTCCT CGACTACCGG CTGGTGGAGT ACCTCGGATC GCTCCCGCTC
GACCAGAAGA TCCGCGGCGG CGTCACGAAG CACGTCCTCC GGCGGGCAAT CCGGGGGCTG
GTTCCGGACG CCGTCCGGTG CAGGATGGAC AAGATGGGTT TCGTCACCCC CGAAGAGGTC
TGGATGGAGG GCGAACTCGC ACCGCGTATC CTCGACCTCT TCTCGACGCC GGAATTCGCA
GAACGACCCT ACTGGGACGC GGAGCGGGTG CTCGAAAACT ACCGCGAGTT CCTCGACGGG
AAGAGTCCTT ATTCTACCGA GTTCTGGCGG ATAGCCTGCG CGGAGATGTG GCTCCAGGCG
TTTGACGCGT AG
|
|---|
| Protein sequence | MCGIAGQFAL NGEEADAALV GAMAQRLAHR GPDGEGTFFS GPVGLAHRRL AIIDLSDEGR
QPMGNEDGSL QIVFNGEIYN YRELREELAA LGHRFASATD TEVILHAYEE WGRDCLARFN
GMWAFALWDG RRRELFCARD RLGVKPFYYA VAGGSFLFAS EIKALRVHPL VGRRPNDRML
STFLAWGVAD HTGETMYDGV FQVPPAHAVV VSEEGAGEPE RYWDFSMNPA SREAGTDDET
AARRARDLLT DAVRLRLRSD VPVGTCLSGG IDSSTVTALI NVLLREESPE SVGERQKTFS
VCFDDPRFDE SRHIDTVVAA TGVANRRTTP GTDGLWEDIE RLLYMQDEPF ASLSIYAQYC
VMRLAREEVK VVLDGQGADE QLAGYIAYQA PYIRGLLRRR EILAALREGI ASARLHRSFF
AWAAGQSRVR LERRELLRGS APEVLRYAGS LDEVLKREVT ASNLPLLLHW EDRNSMAFSI
EARVPFLDYR LVEYLGSLPL DQKIRGGVTK HVLRRAIRGL VPDAVRCRMD KMGFVTPEEV
WMEGELAPRI LDLFSTPEFA ERPYWDAERV LENYREFLDG KSPYSTEFWR IACAEMWLQA
FDA
|
|---|
| |