| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2040 |
|---|
| Symbol | |
|---|
| ID | 4846664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 2033062 |
|---|
| End bp | 2033982 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640116749 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047948 |
|---|
| Protein GI | 126179983 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2006] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCC CAGCGGCATC CGAAGTTTAC GTCATTGATG CATCCGATCG TCACCATGCC
GTCGAGGCGC TCTGGCGCGA GATTGGCCTC CCCTCCCTCG ACGGGAAGGC CGTTGCGATC
AAGGCGAACT TCAACAGCGA CGACCCGTTT CCCGCGACGA CGCATCCCGA TATGCTGGAG
GCGATTCTCG CACGGGTCCG GGACGCCGGT GCCCGGTCGA TCGCGCTCGG CGAGCGGAGC
GGAATGGGAG AGACCGCTCT GGTGCTGAAG AACCGGGGCG CCGCCGATGT CGCGGCCCGG
GTGGGTGCGG AGGTGACGGT GCTCGATTCG GTTCCCCCGG CGGGGTGGGA GGCGATCCCG
CCGGACGGAC TCCACTGGGA GCGCGGGTTC CTGGTCGCCC GGCTCTTCCG GGAGGCCGAT
GCGGTGGTCC AGACCTGCTG TCTGAAGACG CACCGGTTCG GCGGCCACGT CTCCCTCTCC
CTGAAGAACA CAGTCGGGGC GGTGGCGGCG AGGAACCCGG GGAACGGCTA CAACTACATG
GCGGAGCTGC ACTCTTCGCC GCACCAGAGG AGGATGGTCG CCGAGATCAA CCGGTTCTTC
CCCTGCGACG TCGCCATAAT GGACGCGACG GAGGGGTTCT CGACCGGAGG GCCCGAGCGG
GGCAACCGTA TCGCCCCGAA CGTCATCCTC GCGAGCACCG ACCGGGTCGC CCTTGACGCC
GCCGGTATCG CGCTTCTCCG GCACTACGGT TCGACGCCGG AGGTGATGCG GGGCCGGATA
TTTGCAATGG ATACCATTGC CAGGGCTGTG GAACTCGGGA TCGGCGTTAC GTCGGCCGGG
GATCTCCGGC TCGTCGCGCT CGACTCCGAG AGCAAAAACC TCGTCCTCGA TATGCGGCGG
ATCCTGGACG AGGCCGCCTG A
|
|---|
| Protein sequence | MASPAASEVY VIDASDRHHA VEALWREIGL PSLDGKAVAI KANFNSDDPF PATTHPDMLE
AILARVRDAG ARSIALGERS GMGETALVLK NRGAADVAAR VGAEVTVLDS VPPAGWEAIP
PDGLHWERGF LVARLFREAD AVVQTCCLKT HRFGGHVSLS LKNTVGAVAA RNPGNGYNYM
AELHSSPHQR RMVAEINRFF PCDVAIMDAT EGFSTGGPER GNRIAPNVIL ASTDRVALDA
AGIALLRHYG STPEVMRGRI FAMDTIARAV ELGIGVTSAG DLRLVALDSE SKNLVLDMRR
ILDEAA
|
|---|
| |