| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2029 |
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| Symbol | |
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| ID | 4848111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 2021240 |
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| End bp | 2022373 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640116738 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001047937 |
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| Protein GI | 126179972 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACGG ATACCAGTCC GACCATTCTC ATCACCGGGG GAGCGGGGTT CATCGGGTCG
CACCTCGCAA CGGAACTTTT GCAGCACGGC TATCAGGTTC GCATCCTCGA TAACCTGATA
CCACGGGTGC ACGGCCCGGA GCGGCGGCGA CCCGACTACC TCGACCGGCG AGCGGAGGTC
ATCGTCGGGG ATATCCGGGA CACGCACCGG ATGAAGGAGG CCCTCGATGG AGCCGACGCC
GTCATCCATC TGGCGGCGGT CGTCGGGGAG CGGTCGAGCA TGTACCGGCT CGAAAAGTAC
ATGAGCGTCA ACACCGCCGG GACCGCCGTT CTCCTCGAGG CGCTGCTCGA TCAGCCGGTC
GAACGGCTCA TCGTCGCCTC GAGCAGCGCC GTCTACGGGG AAGGCCTGTA CTGCTCGTAC
AACGGCACCG TCTACCCGAA GATCCAACGG ACTCCGGGAG AGGCGGCAAG GGGCGGCTGG
GAGCCCCGGA GCCCGGACGG GGAGGTGATC TACCCCCTCC CGACCCCGGA GACGAAGGAG
GCGTCGCCGC TCTCGGTCTA CGCCATCTCC AAGCACGACC AGGAAGAGAT GTGCAGGCTG
ATCGGGGAGG TATACGGCAT TCCGACGACT ATTCTCCGGC TTTTTCCCGT CTACGGCCCT
CATCAGGGGC ATTTAAACCC GTATTCCGGC ATGCTGACCG AGTACGCGTC CCGCCTGCTC
CAGGATCTCC CCGTACTCCT CTTCGAAGAC GGTTACCAGC AGCGTGATTT CGTGAGCGTC
TACGACGCGG TGCGCGCTTT CCGTCTGGCC CTCGAGTCGC CCGGTGCTGC CGGAGGGACG
TTTAACATCG CAAGCGGCCG TCCCTGTACG TTTAGAACCG TCGCCGGCCT TCTTGCGGCG
ATAACCGGGC GGCAGCACCT CGCCCCGGAG ATCACGGGAA CCAGCCGGAC CGGAGATATC
CGCCACTGCT TTGCAGATAT CGGCCGTGCA CGGGAGGTTC TCGGCTACGA GCCGGAGGTC
ACCCTCGAGG CGGGCCTGCT CGACCTGGTC GCCTGGGTCG AGGCCGAGAT CGCGGGGCGG
CGGAAGGTTC CTGTGCCCGT CAGGGCGTTC GGATCGTCAC GCCTGCGGGT CTGA
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| Protein sequence | MHTDTSPTIL ITGGAGFIGS HLATELLQHG YQVRILDNLI PRVHGPERRR PDYLDRRAEV
IVGDIRDTHR MKEALDGADA VIHLAAVVGE RSSMYRLEKY MSVNTAGTAV LLEALLDQPV
ERLIVASSSA VYGEGLYCSY NGTVYPKIQR TPGEAARGGW EPRSPDGEVI YPLPTPETKE
ASPLSVYAIS KHDQEEMCRL IGEVYGIPTT ILRLFPVYGP HQGHLNPYSG MLTEYASRLL
QDLPVLLFED GYQQRDFVSV YDAVRAFRLA LESPGAAGGT FNIASGRPCT FRTVAGLLAA
ITGRQHLAPE ITGTSRTGDI RHCFADIGRA REVLGYEPEV TLEAGLLDLV AWVEAEIAGR
RKVPVPVRAF GSSRLRV
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