Gene Memar_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2022 
Symbol 
ID4847179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2013642 
End bp2014076 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID640116731 
Productheat shock protein Hsp20 
Protein accessionYP_001047930 
Protein GI126179965 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.12456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGGA GAGAAGACGA CCCTTCCGGC CCCGGGCGGC GGCAGGATGA GGATCAGAGA 
GAAGACGACA GGAAGAGGGG CCGCGACTTC CCGGGCCTCA CCGCAGACTT TCGGGTCGAC
ATTCTCGATC ACGGCGACGA AGTGATCGTC GTTGCGGAAC TGCCCGGCGC GGAAGAGGAC
GAGATCCGGA TCAACCTGCC AAACCCCCAG ACCCTGCGAA TAACGGCGAG GCGCGCCGGG
CCGGTCGAGG AGGAGCCGGA GACCTACTAC ATCCACGAAC GCGGAGACGC CACCCTGAGC
CGGATGATAC GCCTGCCCGC GAGCGTGACG GAAGAAGGCG CCGAAACCGG ATTCAAGAAC
GGCGTCCTCG AAGTGCGCCT GAAGAAGATG AGGAAACCGT CCGGGCCCGG CGGCAAACAG
ATCCCCATCG GGTGA
 
Protein sequence
MTGREDDPSG PGRRQDEDQR EDDRKRGRDF PGLTADFRVD ILDHGDEVIV VAELPGAEED 
EIRINLPNPQ TLRITARRAG PVEEEPETYY IHERGDATLS RMIRLPASVT EEGAETGFKN
GVLEVRLKKM RKPSGPGGKQ IPIG