Gene Memar_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2015 
Symbol 
ID4846952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2004369 
End bp2005343 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID640116722 
Productphosphoesterase, DHHA1 
Protein accessionYP_001047923 
Protein GI126179958 
COG category[R] General function prediction only 
COG ID[COG2404] Predicted phosphohydrolase (DHH superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGAA GCGATCCAAA GCCGGATGCC CCGGGCGGAA ACCTCATGCA GGCGCTCTCC 
GGGAGGACGG AGAACGTCGT GCACCTCACG CACAACGACC TCGACGCCGT CGGGAGCGAC
GCCATTCACC GGAGGACTTA CGGGAAGGTC TTCACCGTCT GGTCTTCGGT CGGCAAATTC
CTCTCCCTCT TCGACGCTGT TGCCGGCTCT CCGGGACGGG GGGACCTCCT CAGCATATCG
GATCTCGGCT ACCAGCAGGG TGTCGAGCAG CGGCTGGCGA AGGCGCGCTC CAACGGGTGG
CGAATCGAGT GGCGCGACCA CCATCGCTGG AAGGACGAGG AGATCCGCGC CGTTGATGCG
AAGACAAGTC TCCTCCACGT CGACGTTTCC ACCTGCGCGA CCGGGATCGT CGCCCGCGAC
CTCGCCCCCG GCGACCCGGT GGCCGAAGAG ATCGCGCGGG TCGTCTGCGA CTACGACCTC
TGGAAGCACC AGGACCCCCG GTCGAAGATG CTCGGCCAGG TGGCGATGCG GAAGGGCTGG
CGGGAGTACG TCCGCGACAA CTTTGTCCGG GGAACGATCG TCGACGCGAG GATCGAGAGC
GAGTACAGCG AGATCGTCCG GGAGATGGAG CGGGACATCA AAAAGAGCAT CCGGCACACC
ACCATCATCG AGGACGGCCG CTACCGGATC GCGTTCGCTC CCCTCTACGG CTACCCGAGC
GAGACCGCTC ACGCCATCCG CGAAGAACTC GGCACCGAGA TCGAGGTGAT CGTCTCTTCA
AGCGGCCGGA TATCCATCCG TTCCGTCTCC CCCGTCAGCC ACCTCATCGC CCGGGAGTTC
TCCGGCGGCG GCCATCCCCA CGCGGCGGGG GGAACGTTTA CGTTCACCCT CCTCGACCGG
CTCCTCTTCT GGCTTATAAA GAGGAATCGC CACTACCGCC GCCTGGCGGA GAAGGCGGAG
TCTATCGAGG AATGA
 
Protein sequence
MGGSDPKPDA PGGNLMQALS GRTENVVHLT HNDLDAVGSD AIHRRTYGKV FTVWSSVGKF 
LSLFDAVAGS PGRGDLLSIS DLGYQQGVEQ RLAKARSNGW RIEWRDHHRW KDEEIRAVDA
KTSLLHVDVS TCATGIVARD LAPGDPVAEE IARVVCDYDL WKHQDPRSKM LGQVAMRKGW
REYVRDNFVR GTIVDARIES EYSEIVREME RDIKKSIRHT TIIEDGRYRI AFAPLYGYPS
ETAHAIREEL GTEIEVIVSS SGRISIRSVS PVSHLIAREF SGGGHPHAAG GTFTFTLLDR
LLFWLIKRNR HYRRLAEKAE SIEE