Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2007 |
Symbol | |
ID | 4846501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1993834 |
End bp | 1995729 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640116713 |
Product | ATPase |
Protein accession | YP_001047915 |
Protein GI | 126179950 |
COG category | [R] General function prediction only |
COG ID | [COG1855] ATPase (PilT family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00148189 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG TACCCGATAC AAGCGTCGTG ATAGACGGAC GCATAACATC GCTGATAAAA ACCGGAGAAT ATAAGGGCGC AACAATAATC ATACCGGAAG CCGTCGTCGC CGAGTTGGAG GCCCAGGCAA ATCAGGGGCG GGAGATAGGG TTTTCCGGTC TGAACGAACT CCAGGAACTC TTCCGGATGT CGGGAGAGAA CGTCATCCAA CTCCGGTTTT CCGGAGAACG CCCGAGCCTC GACCAGGTGA AACTCTCCAG CGGGGGCGAG ATCGATGCCC TGATCCGGAA CGTCGCGATC GACCACGATG CACGGTTCAT CACGAGCGAT CTCGTGCAGG CGGAGGTGGC AAAGGCCAAA GGTCTCGACG TCACCTACCT GCGGCCGCAG ATCGGCGACT TCTCGCCGCT CTCGATCGAC CAGTACCTCG ATGAGGAGAC GATCGCGATA ACTCTTAAGG AGCGGGCTCA GCCGGTGGCA AAGATCGGGA AACTCCGGGA TACCCGCCTG GTAACCCTCC GGGATGCGCC GATGACCGAG TACGAGCTCA AGGGCATGGC GCAGGAACTC CTCGAGCGGG CGAAACGCGA CCCGGACGGC TTCATCGAAC TCGAGAAGCG GGGGATCACG GTCGTCCAGA TCGGGTCGCT CCGGATCTCG ATTGCCCGGC GGCCGTTCTC GGACGGGATG GAGATCACGG TCGTCCGGCC GCTCGTCGAC CTCTCGCTCG ACGACTACGA CATGGCACCG GAGATCAAGC AGCGGATCCT CGGGAACCGC CGCGGTGTCT TGATTGCAGG TCCGCCGGGC GCGGGGAAGA CCACCCTCGC CCAGAGCCTT GCGACGTTCC TCGCCGACAA CAACTTCGTC GTGAAGACGA TGGAGGCGCC GCGCGACCTG CAGGTGCCCG ACCACATCAC CCAGTACACG GCGCTCGAGG GCAGCATGGC GAACACCGCC GAAGCCCTCC TGCTCGTCCG GCCCGACTAC GTGATCTTCG ACGAGATCCG CAAAAGCGAG GACTTCAACG TCTATGCAGA CATGCGCCTC GCCGGGATGG GCATGGTCGG CGTGGTGCAT GCCATGGAGG TGCACGACTG CCTCCGGCGG TTCTGCGACC GCGTGGACTA CAGCATCCTG CCGCAGATCA TCAACACCGT CATCTACGTT GTTCAGGGCG CGATCACGAA GATCTACGAC CTCGAGCTGG CGATCAAGGC ACCTGAAGGG ATGCCCGGCG ACGTGCATAT CCGCCCGGTG ATCGTCGTCC GCGACCACGC CCGGCGGGAA CCCGAGATCG AGATCTTCCG CTACGAGGGA GAGACCCTGG TGATGCCCCT CGGCCGGAAG AGGAACGCCG CAGGACCGGC CGCCGCACCG GCGGAGCCGC CGGTCGTCGC GGCACCGGCT GCGGAGCCCG AGGAGAACGT CACCTGGAAG GTTGCCGAGA AAGAGGTCCA GCGCGAGATC GGGCGGTACA CGACCGGCCC GGTCGAGGTC CGGATCATCA GCGATAACAA GGCCGTCGTC TACATCGAGG ACAAGGACGT CCCGGCGGCG ATCGGGAAGG GCGGCAAGAA CGTCTCGGCG ATCGTGAACA AACTCGGTAT CGGGATCGAT ATCCGGCCAA AAAGCGAACT CGAGGCGCAG AAACCCGTCG AGGAAGAGAT GCAGCTTGTC GGCGGCATCA AGATCCGTCT CGACAAAAAA CAGCTGACGA TCGTATCCCC CGAGAACAGG GGCAAGATCG TGGACGTCTT CGCCGGGAAG GAGTATCTCT TCACGGCCAC GGTGAACGAG GAGGGGGACA TCCTCCTCGC CAAGAACAGC ACGATCGCCC AGGAGATGAT CAAGCGCTAC AACGAGGGCG AGACGATCCG GTTAAGACCG GTATGA
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Protein sequence | MKIVPDTSVV IDGRITSLIK TGEYKGATII IPEAVVAELE AQANQGREIG FSGLNELQEL FRMSGENVIQ LRFSGERPSL DQVKLSSGGE IDALIRNVAI DHDARFITSD LVQAEVAKAK GLDVTYLRPQ IGDFSPLSID QYLDEETIAI TLKERAQPVA KIGKLRDTRL VTLRDAPMTE YELKGMAQEL LERAKRDPDG FIELEKRGIT VVQIGSLRIS IARRPFSDGM EITVVRPLVD LSLDDYDMAP EIKQRILGNR RGVLIAGPPG AGKTTLAQSL ATFLADNNFV VKTMEAPRDL QVPDHITQYT ALEGSMANTA EALLLVRPDY VIFDEIRKSE DFNVYADMRL AGMGMVGVVH AMEVHDCLRR FCDRVDYSIL PQIINTVIYV VQGAITKIYD LELAIKAPEG MPGDVHIRPV IVVRDHARRE PEIEIFRYEG ETLVMPLGRK RNAAGPAAAP AEPPVVAAPA AEPEENVTWK VAEKEVQREI GRYTTGPVEV RIISDNKAVV YIEDKDVPAA IGKGGKNVSA IVNKLGIGID IRPKSELEAQ KPVEEEMQLV GGIKIRLDKK QLTIVSPENR GKIVDVFAGK EYLFTATVNE EGDILLAKNS TIAQEMIKRY NEGETIRLRP V
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