Gene Memar_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2005 
Symbol 
ID4847603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1992632 
End bp1993438 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content58% 
IMG OID640116711 
Productpeptidase A24A, prepilin type IV 
Protein accessionYP_001047913 
Protein GI126179948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.234873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTTC CGCCCGTGGT AACTGTTCCC CTTATGATTG CAGCGGCTGC AGTAGGGATC 
ACACTCATAT ATGCGTCCAT CCTGGATGCA AAGGAGCGGC GGGTGCCCCA CAAAACCTGG
CGTCCCGCAC TCGCGATCGC GATCCCGGCG GCCGTCTGGG TATACGGACT GACCATCCTC
GCGGACTGGC AGGCGGCGGT GGGGTACCTC GTCCTGGTCG CGGTCTTCTG CGGATTTTTT
TACCTCTTCC AGGCCGTAAA CCTCTTCGGG GGGGCGGATG CATACGCGCT CATCATCATA
ACCGCATGCA TCCCGTTCTA CCCGCTCGAG CCGTTCTTCG GTGCATCGCC CCTCGGGTTC
TTCCCGTTCA GCGTGCTGAC GAACGCCGTG CTCATCAATA TCGCGGCACC CGTCGCAATA
CTCGCGAAGA ACATCCTGGA GGGGAACCGG GCCCCGCTGC CCTGCCTCCT GCTCGGCTTT
CCCGTAGACG GAAGATCGAT CCAGAACGAA TTCGGTTTCG TCATGGAAGA TATCGAGGAG
GGGGAGGACG GCAGACTGGT GAGACGGTTC GTCGGATTTA CGGAATCGCT CGGGCGTATC
GTGCGGGGGG AGCGGCGGTT ATACACAAAA GATCTCAGGC TGCACCCAAA AGACTACCAG
AGGGAGATTG CCCTCTACAG GAAGGCCGGC AGGGTCTGGA TATCCTACGG CATTCCATTC
ATCATACCAA TCACTGCGGG TTTTCTGACC GCACTGTTCA TGGGAGATAT CCTCTTTGTA
ATTATGAAGG CAATCGCGGG AATGTGA
 
Protein sequence
MILPPVVTVP LMIAAAAVGI TLIYASILDA KERRVPHKTW RPALAIAIPA AVWVYGLTIL 
ADWQAAVGYL VLVAVFCGFF YLFQAVNLFG GADAYALIII TACIPFYPLE PFFGASPLGF
FPFSVLTNAV LINIAAPVAI LAKNILEGNR APLPCLLLGF PVDGRSIQNE FGFVMEDIEE
GEDGRLVRRF VGFTESLGRI VRGERRLYTK DLRLHPKDYQ REIALYRKAG RVWISYGIPF
IIPITAGFLT ALFMGDILFV IMKAIAGM