| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2002 |
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| Symbol | |
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| ID | 4847291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1988226 |
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| End bp | 1989149 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640116708 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001047910 |
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| Protein GI | 126179945 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAGTT ACGAGCGGTT CTGCTTCAAC CTGATCGGGC ACGGCCTGAA AAAGAAGCGG
GGAGACTACA TCAGCCTCCG AAACGACCTG ATGGGAGCCC GGATGAATAC GCCGTTCGAG
GCGTATCTTG CGACCGCTTA CGTTTCCTCG GTCGCCGTGG GGCTGGCCGC CGCCGCGCTC
CTCGGGCTCC TGGCCTACCT CCTGCGGATT CCCGATATGA TCGTCTATCG CGGAGCGGTT
CCGGAAGTCC TGTATGCGTT GAACGACTAC AAGATGCTGC TCGGCACCGT TGCCATCACG
GTCATTTCTC TCCTGGTGTT CGGGGGGATA ACCTACCTGA TCTACCTCCT CTATCCGGGT
ATAAAGGCAG GAGAACGTCG CCGGAATATC GATGCCACCC TCCCGTATGC CATTAACTAC
GTCACCGCCA TGTCTTCGGC CGGGATCACC CCCGACGAGG TCTTCCGGCT GCTCGGCCAG
AGCACGATAT ACGGGGAAAG CGCCGTCGAA GCGCGCTACA TCTCCCGGGA AACCGATTTC
TTCGGGAAGG ATCTTCTCGA TGCCCTGCGG ACGGTCTCGC AGGCGACGCC GAGCGAACGG
ATGCGGGAGT TCCTGCAGGG AGCCGTTGCG AGCATCTCCA GCGGGAGCAA CCTCACGGAG
TACTTCCGCA ACAAGGCTCA CCAGTACACG CTCGAGAACA ACCAGCAGCA GAAGTCGTTT
TTAGAGACGC TCGGGCTGAT CGCGGAGTCC TACGTCACCG CGATGGTCGC CGGCATGCTC
TTTCTGATCA TCCTGCAGTC GGTGATGACG ATCCTCTCGG GCGACTCGGA TCCGTTCTTC
CTCTACGTCA TCATCTACAT GATTGTGCCG TTCGGGAGCA TGATGTTCGT CGTCCTGATC
AGTTCCATGA CTCCGGAGGT GTGA
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| Protein sequence | MNSYERFCFN LIGHGLKKKR GDYISLRNDL MGARMNTPFE AYLATAYVSS VAVGLAAAAL
LGLLAYLLRI PDMIVYRGAV PEVLYALNDY KMLLGTVAIT VISLLVFGGI TYLIYLLYPG
IKAGERRRNI DATLPYAINY VTAMSSAGIT PDEVFRLLGQ STIYGESAVE ARYISRETDF
FGKDLLDALR TVSQATPSER MREFLQGAVA SISSGSNLTE YFRNKAHQYT LENNQQQKSF
LETLGLIAES YVTAMVAGML FLIILQSVMT ILSGDSDPFF LYVIIYMIVP FGSMMFVVLI
SSMTPEV
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