Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2001 |
Symbol | |
ID | 4846725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1987175 |
End bp | 1988224 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640116707 |
Product | type II secretion system protein |
Protein accession | YP_001047909 |
Protein GI | 126179944 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTTA AAGATCTTTT CAATGATTTC TTGAACAGGA GACCTTCGGA TCAGGAGAGG ATCCCGGAGG ATACTCCGGA TGCCGACCGG TTCGTGGAGC AGGACCAGGA GATCTTCGGC AGGATTGAGA ACTGGCAGAA GTACCAGGAA GGGTTTTACC GGTTCCTCAA ACACCCGTTC AGGGTGATGA TGGAGGAGCC CTACACCGTC CTCTTCGTAT CCGTCCCGGT TGCGCTGCTC CTCTTTATCG GCGGGTTCGT GAGCATGGTG ACGTCCTACG GCATCGGCGC CCTCTTCACG ACGACGATGA TCGACGACGT CTTCGTCTTC GCGCTCCTCA TTGCCATCGT GCCGCTTGGC CTTCTCGATT TCAAGGAGGC GTGGCGCGTA TCGAGCGTCG AGGCGTCCCT TCCGAACTTT TTCCGGGACG TGGCCGGGAT GAACGATTCA GGTATGACGC TCCCGCATGC CATTCATATC GTCTCGGAGG GCGAATACGG GGCGCTCACA CCGCACATCC GCAAACTCGA CACCGAGATG TCCTGGGGTG TCCCGTTCGT GGAGGCCATC CGCCGGTTCG GAAAGACCGT GAATACCCCG CTCGCGGAGC GGAGCGTCGA CCTGATCGCC CACGCGAGCT CCGCCGGCGG TGACGTGAGC GAGGTGCTGC GGGCGGCGGC ACACGATGCT TACGAGTTCT TCAACTTAAA GACGGAGCGC AAAAACGGGA TGATGATCTA CATGATCATC ATCCTGATGT CGTTCTTCGT CTTCCTCTTC GTCATCGGGG TGCTTTCGGG CACCTTCCTC ACCACGATGG CGGAGGCGGG GGAGGCGGTC TCTGCGTCGG GCTCGAGTTC GGCCCAGTCG TTCATGGGCA ACGTGGACCT CTTCCTCTAC AACCGGATCT TCTGTCACTC CGCGCTGATT CAGGGATTCT TCTCGGGGCT GGCGGCGGGC ATCATGGGCG AAGGCCGGGT GGTCGGTGGG CTGAAGTACT CGGCGCTGAT GGTCATGATC GCCTGGATCG CGTTCCGGTT CATCATCTGA
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Protein sequence | MGFKDLFNDF LNRRPSDQER IPEDTPDADR FVEQDQEIFG RIENWQKYQE GFYRFLKHPF RVMMEEPYTV LFVSVPVALL LFIGGFVSMV TSYGIGALFT TTMIDDVFVF ALLIAIVPLG LLDFKEAWRV SSVEASLPNF FRDVAGMNDS GMTLPHAIHI VSEGEYGALT PHIRKLDTEM SWGVPFVEAI RRFGKTVNTP LAERSVDLIA HASSAGGDVS EVLRAAAHDA YEFFNLKTER KNGMMIYMII ILMSFFVFLF VIGVLSGTFL TTMAEAGEAV SASGSSSAQS FMGNVDLFLY NRIFCHSALI QGFFSGLAAG IMGEGRVVGG LKYSALMVMI AWIAFRFII
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