Gene Memar_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2000 
Symbol 
ID4847882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand+ 
Start bp1986521 
End bp1987102 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content54% 
IMG OID640116706 
Producthypothetical protein 
Protein accessionYP_001047908 
Protein GI126179943 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA GAAAGATCTC TCCATCGGAC GCAACCGTTC TCGATTACAT ACACGTAAGG 
GTCGTCGATT ACGATCCGGT CTGGCCGGAT CTCTTTCGCA CGGAAGCCCG CCGGATAGAA 
GATATCCTGA AAGAGAATCT GGTGCAGATC TTTCATATCG GCAGCACGTC GGTGCCGGGC 
CTCCGGGCAA AACCCATCAT CGATATCATG CCGGTTGTCC TTGACATCGA GCGGGTTGAC 
GAGAGATCCG GGCAATTCGA GGCTATCGGC TATGAAGCCA TGGGCGAACT CGGCATACCC 
GGAAGACGCT ACTTTCGCAA GGGCGGGGAG AACCGCACCC ACCAGATACA CGCCTTCCAG 
TACGATAATG TCCAGAACAT TACAAGGCAT CTGGCCTTTC GGGATTATCT GAGATCCCAT 
TCCGATGTCG GTTGCGCATA CGCCGCTCTC AAGTCGGAAC CTGCCGTGCG GTATCCCGGG 
GATAGAGAGG GATACTGCAA CGGCAAAGAT GGTTTCGTAA AATGCGTGGA ACGTGACGCG 
TTACGATGGT ACTGGAAAAA ATACGATGTC GGTCGGTGTT AG
 
Protein sequence
MSERKISPSD ATVLDYIHVR VVDYDPVWPD LFRTEARRIE DILKENLVQI FHIGSTSVPG 
LRAKPIIDIM PVVLDIERVD ERSGQFEAIG YEAMGELGIP GRRYFRKGGE NRTHQIHAFQ 
YDNVQNITRH LAFRDYLRSH SDVGCAYAAL KSEPAVRYPG DREGYCNGKD GFVKCVERDA 
LRWYWKKYDV GRC