Gene Memar_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1998 
Symbol 
ID4847427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1983330 
End bp1984976 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content66% 
IMG OID640116704 
Productribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 
Protein accessionYP_001047906 
Protein GI126179941 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATCT CCCCGATAGC CCGCCTCCTC CTGGAGGGGC GCTACCTCCT CCCGGGAGAG 
ACGCCGGCCG GCCTCTTCTC CCGGGTCGCC GACGCCGTGG GCGGGACGGC ACGGTCCCGC
GAGTTCTTCT CGCTCCTCTC GGCCCTCCTC TTCCTCCCAA ACTCCCCGAC CCTGATGAAC
GCGGGCACTT CCGCCGGGCA GCTCTCGGCC TGCTTCGTCC TTCCGATGGA GGACACGCTC
GAAGGGATAT TCGGGACGCT CGGCCACATG GCGCTCATCC ACCAGTCCGG GGGAGGAACC
GGATTCTCGT TCTCCCTTCT GCGGCCCCGG GGCGACGCCG TCAACGGGGT CACAGGCGCC
GCGACCGGGC CGGTCTCGTT CATGCGGGTC TTCGATGCGG CGACCGGAGC GGTCAGGCAG
GGCGGCCGGC GCCGGGGGGC GAACATGGGG GTGCTCGCGG CCTCCCACCC CGACATCGAG
GAGTTCGTCA CCGCAAAGCA GGAAGGGGGC CTCTCGAACT TCAACATCTC TGTCGGCGTC
GACGAGCGGT TCTTCCGGTG CCTCGCGACG GGGAAAGAGT ACGACCTCAT AAACCCCCGC
GACGGCAGTG TCTGGAAGAG CGTCGACGCC GGATCGCTCT GGCGTCTCAT CGCCGCCTCC
GCCTGTATCT CCGGCGAACC GGGCGTGCTC TTTCTCGACG AGATCAACCG CCAGAACACC
ACCCCGCATC TCGGCCGCAT CGAAGCGACC AACCCCTGCG GCGAGCAGCC GCTCTACCCC
TACGAGAGCT GCAACCTCGG AAGCGTCAAC CTTGCCCGGT GTGTCAGGCA GCACGACCTC
GACGAAGACC TGCTTATAAC GGTCGTCCGG TGCGGCGTCG ACTTCCTCGA TGCGGTCATC
GACGCGAACC GTTTCCCCCT CCCCGAGATC CGGGAGAGGA CGCTTGCGAC CCGCAAGATC
GGCCTCGGGG TCATGGGGTT CGCCGAGGCG CTCATACGCC TCGGAATACC CTATGAGTCG
GAGGAGGCAC TCCGGTTTGC CGGGAGCCTG ATGGAACATA TAGAGGAGAT GGCCCGGGAG
CGGTCGGAGG AGATCGGAAA GGAGATCGGG TCGTTTCCGG CGATCGAGGG CTCGATCTTT
TCGGGAGAGA TGCGGAACGC CACCGTCACC ACCATCGCCC CCACAGGCTC GATCCACCTC
ATCGCCGGGA CCACAAGCGG CATCGAGCCG GTCTTCTCGT TTGCCTACGA CCGGACGATC
GACGGCCGGC CGGTCAGCAT CGTGAGCGAC CTCGTCGCCG GGTTCCTGCC CCGGACCGCC
GGCGGGAAGG ACGTCGCGGA GCATGTCCGC CGTCACGGCA CGGTCGCCGG CCTCCCCCTC
GACGACCATG CCCGCGACCT CTTCAGGACG GCAACCGAGA TCGCACCGGA ACACCACGTC
CGGATGCAGG CGGCGTTCCA GAAACACGTG GACAACGCCG TCTCGAAGAC GGTAAACCTG
CCACAGAGTG CAACCGTCGA CGAGATCGCC TGCGTCTTCT CCCTTGCCCA CGACCTCGGG
TGCAAGGGCA CTACCGTCTA CCGCTACCGG AGCAGACCCG ACCAGATATT CTCGCTAGGG
TGCGATGTCT GCCTGATTGA CGGATGA
 
Protein sequence
MEISPIARLL LEGRYLLPGE TPAGLFSRVA DAVGGTARSR EFFSLLSALL FLPNSPTLMN 
AGTSAGQLSA CFVLPMEDTL EGIFGTLGHM ALIHQSGGGT GFSFSLLRPR GDAVNGVTGA
ATGPVSFMRV FDAATGAVRQ GGRRRGANMG VLAASHPDIE EFVTAKQEGG LSNFNISVGV
DERFFRCLAT GKEYDLINPR DGSVWKSVDA GSLWRLIAAS ACISGEPGVL FLDEINRQNT
TPHLGRIEAT NPCGEQPLYP YESCNLGSVN LARCVRQHDL DEDLLITVVR CGVDFLDAVI
DANRFPLPEI RERTLATRKI GLGVMGFAEA LIRLGIPYES EEALRFAGSL MEHIEEMARE
RSEEIGKEIG SFPAIEGSIF SGEMRNATVT TIAPTGSIHL IAGTTSGIEP VFSFAYDRTI
DGRPVSIVSD LVAGFLPRTA GGKDVAEHVR RHGTVAGLPL DDHARDLFRT ATEIAPEHHV
RMQAAFQKHV DNAVSKTVNL PQSATVDEIA CVFSLAHDLG CKGTTVYRYR SRPDQIFSLG
CDVCLIDG