| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1990 |
|---|
| Symbol | |
|---|
| ID | 4847169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1975643 |
|---|
| End bp | 1977067 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640116696 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047898 |
|---|
| Protein GI | 126179933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.842738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTC GCTACTACGA CTCGGGCGGC TCTTGCGACT CCATGGTCAG CGATCTGGTG
GTCTCCGCCC CGGTCCTTCA GTTCACTCAC GCGGGCGGCC AGATCGGGAT GTGGAACCAT
GATTCGGGTA TCCTGAGCGA CAACGACGGC GATGTGACCT ATACCCTGCG GTTCTACCAG
GATATCGATA CCGACGGCGA CGGCATCCCC GACTGGCTCG AAGTGGCCGG CTGGTGGGAC
GGCTTCGGGA ACCGGTACTT CACCGACCCG TACAGCGCTG ATTCCGACGG CGACGGCCTG
ACCGACGGCG AGGAGGCCGG ACAGATGGTC CTGGTCAACG GGAAGATCTA CTTCATCCTC
GTGAGCGACC CGAACAGCGT CGACGGGGAT GGGGACGGGA TCAGCGACGC ACTCGAACTG
GACGAGTTCG GTACCGACCC GCTGGCGCGC GACTCGGATC ACGACGGCCT GACCGATGCC
TACGAGCTGG ACAACGGTAC CAATCCCAAT AATCCCGATT CCGACGGCGA CGGCTGGGTC
GACGGCAAAG ACGGCGAACC TGGCGATGCC GACACGCACG AGTACAGCGC CGGGCGCGCA
GCGGCCGAAC TGGTCCTCGG GTTCACCCTG GGCGCCTACG CCGAGGAGAA CCACGACAAC
GTCTACTACC TGATCGGCTC CTCATTGAGC GGAATCGTCT TTGTCGGCGA CATCCGGGAC
GCCGGGGTGT ACATCTCCCA GGGGGACAAG CAGATGGCGC TCGTCTGCCT CGTCGGGCTG
GTTCCCACGG GTGGTGATGG AGCACGGTAC ATCTCGAAGA TCGGGAAAGA AATGGCCGAA
TACTCGGCGG AAAATGCTGC CAAAGTGTCC GCGAAGATTG AGTTCCGGCG CACGGCCGTT
GAGGCCATCC AGAAGAGCGG TGCGGGTGAG GTGGAGAAAG TCGCCTTGCT CGACGAAGCG
TTCCTGGGGC TGGGGACAAG AGTTGTCAGA GCAGCGGATG GTGTTACTGC CGATGACGTG
CTTGATCTCG TTGGCGATGA GACAAAGAAA CTCACGCCAA CCGAGATGCT GCGAGTGACC
AAACGTGGGG ACGGAACTGC TGTCTGGCTG GAGGAAGGTA CACTTGACTC GGCTGGTGGT
GAGGTTCTGG GAACCGTATA TGACAATGGT GGATCCGGAT GGGTTCATAT CCAGAATAAT
CACATCTACT ATCATGGTAC CAACCAGTTT AGAGATGTCT TCGGCCCTGT GTATGAGGAT
CAGGATGCAA TAAAGAATCT TATCCTGGAT GGGGCGAAGA ATGGGCAAAA GATTAATGAT
AACGGAGTCT ACCACTACGT GGAGCCGAAT TCTGGGGAAA TATTGTTGTT GATTATTGGA
AGTAATGGCT ATATTGTAAC GGCACACCCC TTGAGGATGA ACTAA
|
|---|
| Protein sequence | MTVRYYDSGG SCDSMVSDLV VSAPVLQFTH AGGQIGMWNH DSGILSDNDG DVTYTLRFYQ
DIDTDGDGIP DWLEVAGWWD GFGNRYFTDP YSADSDGDGL TDGEEAGQMV LVNGKIYFIL
VSDPNSVDGD GDGISDALEL DEFGTDPLAR DSDHDGLTDA YELDNGTNPN NPDSDGDGWV
DGKDGEPGDA DTHEYSAGRA AAELVLGFTL GAYAEENHDN VYYLIGSSLS GIVFVGDIRD
AGVYISQGDK QMALVCLVGL VPTGGDGARY ISKIGKEMAE YSAENAAKVS AKIEFRRTAV
EAIQKSGAGE VEKVALLDEA FLGLGTRVVR AADGVTADDV LDLVGDETKK LTPTEMLRVT
KRGDGTAVWL EEGTLDSAGG EVLGTVYDNG GSGWVHIQNN HIYYHGTNQF RDVFGPVYED
QDAIKNLILD GAKNGQKIND NGVYHYVEPN SGEILLLIIG SNGYIVTAHP LRMN
|
|---|
| |