Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1987 |
Symbol | |
ID | 4848314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1973693 |
End bp | 1974481 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640116693 |
Product | CBS domain-containing protein |
Protein accession | YP_001047895 |
Protein GI | 126179930 |
COG category | [K] Transcription |
COG ID | [COG4109] Predicted transcriptional regulator containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGA AGAAGGTCAA GGATTACATG ACCTACGACG TCGTCACCGT CAACGCCCAC GGAACAGTCC GCGACGTCAT CGAGACCATA AAAAAGACGC ATCACGACGG TTTCCCGGTC GTGGAGAACT CGAAAGAAGT GGTAGGCTAC ATATCGGCAC GGGATCTCCT CTTCGCCCAT CCGTCCACGC CGATAGAGCA GATGATGTCC CGCCACCTCA TCGTCGCCGA CCCGGACATG AGCGTGAACG ACGCCGCCCG TGTCATCTTC CGCTCCGGCA TCCAGAAACT CCCGGTCGTC AACGACAAAA ACGAGCTCAT CGGGATCATG TCGAACGCCG ACGTCATCAG GTCCCAGATC GAGCACGTCT CGCCGGAGAA GGTCTTCAAG TTCATCGAGA CCCTCAAAAA ACTCTACGGG GTCGAGCCGG CCTTACGAAG AGGCTCGGTC CCGATCAATG ATCTCCTGCC CACCCAGTCG AAGATCTACG AGGACGAACT GGAGGGGAGG ATGTACGAGA TCAAGAAGGG GCTTGCCGAA CCCCTGATCG TGGTCAGGCG GCCGGGCCGC TGGATCCTGG TCGACGGCCA CCACCGGGCG ATCGCGGCGA AGAGGCTCGG GATCAAGAAC CTCGACGCCT ACATCATCGA GGTCCGGGAG AACATCGAGC TCGGGATGGA GCGGACGGCC CGGACGCTGA ACCTCAAAAC GCTCGACGAC ATCAAGGTGC TCGATTACGC CCGCCATCCC CTCGTCGCGC TGACGCACCG GCTCGTGCGG CACGGGTGA
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Protein sequence | MDKKKVKDYM TYDVVTVNAH GTVRDVIETI KKTHHDGFPV VENSKEVVGY ISARDLLFAH PSTPIEQMMS RHLIVADPDM SVNDAARVIF RSGIQKLPVV NDKNELIGIM SNADVIRSQI EHVSPEKVFK FIETLKKLYG VEPALRRGSV PINDLLPTQS KIYEDELEGR MYEIKKGLAE PLIVVRRPGR WILVDGHHRA IAAKRLGIKN LDAYIIEVRE NIELGMERTA RTLNLKTLDD IKVLDYARHP LVALTHRLVR HG
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