| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1962 |
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| Symbol | |
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| ID | 4848239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1956375 |
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| End bp | 1957613 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116668 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_001047870 |
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| Protein GI | 126179905 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA TACAAGAGGT AGAAGCAATT CTTGGATACG GCGATACCTG CAACCACTGC
CTCGGGCGGT TCTTCGGCAA GCGGTCGTTT GGGCTGACGA ACGAGGAGCG GGGCAGGGCT
CTGCGGGTCG CGCACGAACT TGCGACAAAC GAGCCGCACC ACGAACCTGA CCCGGAATCC
TGCTGGATAT GCGGCGGCGA ACTCTCCCGC ACCGAAGAAT GGGCGAAGAG GGTGGTCGAA
GCAGTGGACG GCATCGAGTT CGAGACCTTC CTTATCGGGA CGAAGGTGCC GCCGCTCGTC
GCGGAGAGCG AGGAGATGGT CTGGAGCGAT CTCTCGCTCC GCGACCCCGA ACCGCTGAAG
GCCGAGATGA ACCGGGAGGT CGGAAAAGCC GTCTCGGCAA TCTCCGGGAA GACGGCCGAC
CTCAAGAAGC CCGATGTCGT CGCGATCCTC GATCTCGGTG AGGGCACCGT CGAGGTGCAG
GTCAACCCCG TCTTCTTCGT CGGCCGCTAC CTGAAGTACG AGCGCGGCAT CCCCCAGACT
CACTGGGACT GCCGGGCGTG CCGGGGCGCG GGATGCGAGA AGTGCAACTT CACCGGCAAG
CAGTACGCCG ACTCCGTCGA GGAACTGATC GGCCGGCCGG CAATCGAGGC TTTTAACGCA
GCAAACGCCG TCCTGCACGG TGCCGGTCGG GAGGATATCG ACGCCCGGAT GCTCGGGTCG
GGCCGCCCCT TCGTGCTGGA GATCGAGGAG CCGCGGAAGC GTTCGGTGGA TCTCGCGGCG
CTTGAAGCGG AGATCAACCG GGAGGCCGCC GGCCGGGTGG AGGTTCACCT TGAAGGATGG
GCGGATCGGA AGATGGTGCA AAGCCTTAAG TCCGACAAAG CGCATAAAAA ATACAGGATC
CTGGTCGAGA TCGACGGTTC TGTAACCCCA GATGAGTTCA GGGCGGCCCT CGATCAGTTA
AAAGGTGTAA CGATACGGCA GCGCACCCCG AATAGGGTGG CACACCGACG GGCAGATAAA
GTTCGGGAAC GGCAGGTCCT CGATATCGAA TGCACGGGTA GCGTCGACGG CAGATACTGG
GTCGAAGTCG TCGGCGAAGC GGGCCTGTAC ATCAAAGAAC TGGTATCGGG TGACAACGGC
AGAACCCAGC CCAGCCTTGC CCAGATCCTG GGGCGCACCG CAAGTGTTGT CAGCCTCGAT
GTGGTGCTGG TCAAAACAGC TAACGAGTAT GGTGAGTAA
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| Protein sequence | MDIIQEVEAI LGYGDTCNHC LGRFFGKRSF GLTNEERGRA LRVAHELATN EPHHEPDPES
CWICGGELSR TEEWAKRVVE AVDGIEFETF LIGTKVPPLV AESEEMVWSD LSLRDPEPLK
AEMNREVGKA VSAISGKTAD LKKPDVVAIL DLGEGTVEVQ VNPVFFVGRY LKYERGIPQT
HWDCRACRGA GCEKCNFTGK QYADSVEELI GRPAIEAFNA ANAVLHGAGR EDIDARMLGS
GRPFVLEIEE PRKRSVDLAA LEAEINREAA GRVEVHLEGW ADRKMVQSLK SDKAHKKYRI
LVEIDGSVTP DEFRAALDQL KGVTIRQRTP NRVAHRRADK VRERQVLDIE CTGSVDGRYW
VEVVGEAGLY IKELVSGDNG RTQPSLAQIL GRTASVVSLD VVLVKTANEY GE
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