Gene Memar_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1955 
Symbol 
ID4848152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1950780 
End bp1951586 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID640116661 
Productmethyltransferase type 11 
Protein accessionYP_001047863 
Protein GI126179898 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACATCA TCGCACACGC GTGGAACCCG GGCGACTACC ACCGGCACTC CGCCGCCCAG 
GCCCGCTGGG CGCATGAACT GATTGGAAAG ATCAAACTCG CCGGCGACGA ACGGGTTCTC
GACCTCGGGT GCGGCGAGGG AAAGGTGACC GCGGAGATTG CCGCCCGCCT CCCCTCCGGC
TCGGTGCTCG GCCTTGACGT ATCCCGTGAC ATGATCGCCT TCGCCCGGGA GCGCTTCCCC
CCGGAGCGGT ATCCGAATCT CCGCCTTATC GAAGGCGACA TGCTCGACCT GCCGTTCGAT
GAGGAGTTCG ACGTGGTCTT CTCGAACGCC GCGCTGCACT GGGTCGCCGA CCACGGCAGG
GTCTTTCAGG GTATCTCTCG CGCTCTCCGG CCGGGGGGAA GGGTCCTCCT CCAGATGGGC
GGGAAGGGAA ACGCCGCACC GATCCTCGCG ATCGCGGACG AGATACTCAC GGAGGAGCCC
TGGACGAGGC TCTTCGGTGG TCCGGCCCCC TGTTACGCCT TCTACGGTGC CGAGGAGGAG
CGTGGACTGC TGGAAGCGGC AGGGCTCACG CCCCTTCGGG CCGAGCTGAT CGGGAAAGAC
ATGGCGTTCG ATCTACCTGA AGGCCTTGCG GGGTGGGTTC GGACCACCTG GCACCTCTAC
CTGGAGCCGC TGCCCGAAGA CGTCCGGCCG GCGTTCATCG AAGAGGTGGT GAACCGATAC
GTGGAGAGGT TCCCCCCGGC CGACGGCCGC ATCCACGTCC CCATGGTGCG CCTCGAGGTG
GAAGCGGTCA AAGAGCCGGA GCCCTGA
 
Protein sequence
MNIIAHAWNP GDYHRHSAAQ ARWAHELIGK IKLAGDERVL DLGCGEGKVT AEIAARLPSG 
SVLGLDVSRD MIAFARERFP PERYPNLRLI EGDMLDLPFD EEFDVVFSNA ALHWVADHGR
VFQGISRALR PGGRVLLQMG GKGNAAPILA IADEILTEEP WTRLFGGPAP CYAFYGAEEE
RGLLEAAGLT PLRAELIGKD MAFDLPEGLA GWVRTTWHLY LEPLPEDVRP AFIEEVVNRY
VERFPPADGR IHVPMVRLEV EAVKEPEP