| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1950 |
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| Symbol | |
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| ID | 4846439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1944242 |
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| End bp | 1946860 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640116656 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001047858 |
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| Protein GI | 126179893 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.998424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG GACCGACCCC GGCAATGCGG CAGTATTATT CAGCGAAAGC CCGGTACCCC
GACGCCGTCC TCTTCTTCAG GATGGGGGAC TTCTACGAGA CCTTCGGCGA GGATGCCGGC
GTGGTGGCCC GCGAACTCGA CATCACCCTG ACTGCCCGGG GCAGGGACAA GAACGGCGAC
CGGATGCCGC TCGCGGGCGT TCCCCACCAC GCCGCCGAAG GCTACATCGC CCGCCTGGTG
AACAAGGGCT ACAAGGTGGT GATCTGCGAC CAGGTGGAGG ACCCGAAGAC CGCAAAAGGC
ATCGTGAAGC GGGACGTCAC CCGGGTGATC ACCCCCGGAA CCCTTATCGA CTCCTCGATG
CTCGCCTCGG CCGGCGCCCA CTACCTGATG GCGGTCGCCC CCGACCGGAA AGAGACCTTC
GGCCTCGCGT TCCTGGACGT CTCCACCGGC GAGTTCTTCG TATCCTCGGG CAGCGGCGGG
CGCGAATACG CCGAGATCGT CTCGGAGGTC GTCAGGTACC GCCCGACGGA GGCGATCGTC
CCCGAGAGTT TCGGTGACAC GCTCCCCGCC CGGCTCGAGA GCCTCGGGGT GCCGGTGAGC
CGCTACCGCG ACGACGCCTT CGATCCCGAC GCGGCCTATG AGCGGCTCTG CGGGCAGTTC
GGGACGACGA CGCTCGACGG CTACGGGTGC GCCGGAATGC CGGGAGCAGT CGCCGCGGCC
GGAGCGGCGC TCTGCTACGC CCAGGAGACA CAGCAATCAT CCCTCTCCCA CATCTCGGGG
CTTTCGACAC GGGTGCCGTC GGGGAACATG GCGCTCGACG CGATCACCCT GCGGAACCTC
GAGATCACGG CGGGCATCCG GGGCGAAGGC GACGGGAGCA CACTCCTCTC CGCTCTCGAC
GTCACGGAGA CATCGATGGG GAGCCGGACG ATGCGGTCGT TCCTGATCGC CCCCCTGCTC
GGGAAGGATG CCATCGAGGC GAGGCTCGAT GCGGTGGAGT GGTTCTTCGA CCACGCGCTT
GAGAGGCAGG CGCTTCGCGC GACCCTCGGC GACTTCGCCG ACACGGAAAG GATAGCGGGA
AGGATAGCCT ACGGGAACGC AGGGCCCCGG GATCTCGCGA CGCTCAGGGA TTCTCTCTGT
GCCATCCCGG ACGTGAAAAC GCTCTTCCCC ACCGACGCAC CCGTGCGGGT CCACGATGCC
CTCGATGCGA TGAGCGATCA CGCCGCCGTC ACCGATCTCA TCGGCCGGGC GATCGTCGAC
GAGCCGCCGG CCACCGCGCG TGCCGGCGGG ATGATCCGGG AGGGGTACAA CGCGAAGCTC
GACGAACTCC GGCACCTCGC GACGTCCGGG AAGGACTGGA TCGCGGAGTT CCAGCAGCAG
GAGCGGGAGA GAACCGGGAT TAAGTCGCTC AAGGTCGGCT ACAACCGGGT CTTCGGCTAC
TACATCGAGG TGACGAGGCC GAACCTGCAC CTGGTGCCGC CGGAGTACGA GCGCCGGCAG
ACGACCGCGA ACGGCGAGCG CTACACGATC CCCGACCTCC GGGAGAAGGA GGCGATGATC
GCGACCGCCG AAGAGCGCCT TACCGCCCTC GAAGCGGAGA TCTACACCGA ACTCGTCCGG
ACGCTCGTAG CAGAGGTCGC CGGTATCCAG GCGACCGCCC GGGCGGTGGG GCTCCTCGAC
GTCTATTCGG CGCTTGCCGA AGTCGCCGCC CGCTACGGCT ACACCCGCCC CGCGATCGAG
GAGAGCGGCC GGGTTGTCAT CCGCGACGGC CGCCACCCGG TGGTGGAGCG GCACCTCCCG
GTCCCGTTCG TCCCGAACGA CACGGAACTC GATTCCGCCG CCGACCAGAT CATGATCATC
ACCGGGGCGA ACATGGCGGG CAAGTCCACC TACATGCGGG CGGTGGCGCT CTGCTGCATC
ATGGCCCAGG TGGGAAGTTT CGTCCCGGCC CGGCACGCGA CGATCGGGAT CGTCGACCGC
GTCTTCACCC GGGTGGGAGC GTTCGACGAC CTCGCCTCCG GGCAGTCCAC GTTCATGGTC
GAGATGCTGG AACTTGCAAA CATCTTAAAC AACGCCACCG CGGGAAGTCT CGTCATCCTC
GACGAGATCG GGCGGGGGAC GAGCACGCTG GACGGGTGCG CCATCGCCCG GGCGGTGGTG
GAGTTCCTGC ACGGGAAGGC GGTCGCGGGG CCGAGAACGC TCTTTGCGAC CCACTTCCAC
GACCTGATCG ACCTCGAGGG CACCCTCAAG CGGGTGAAGA ACTTCCACTT CGCGGTGAAG
GATACCGGAA CCGACGTCGT CTTCCTCCGT AAGATCATCC CCGGCGCGAC CGACCGGAGT
TACGGTGTTC ACGTCGCCCA CCTTGCCGGG ATCCCGAAGA AGGTGACCGA CCGGGCGATG
GAGATCCTGA AGGAGGCGTC GGCGCGGGAG TTCTCCGGCG GCCCGCGGGC CCCCCGCTAC
ACCCAGATGC TCCTCGTCGA CCCCGGCGAG CGGGCCGTTC AGGAGAACCC CGCAGTCAGG
GAACTCAAAG ATCTGAACCC GAACGAGATG ACTCCGATCG AGGCGTTAAC CACCCTCTGC
CGCCTCCAGA GGATTGCAAA CGGGGAGAGA GAGCGATGA
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| Protein sequence | MTDGPTPAMR QYYSAKARYP DAVLFFRMGD FYETFGEDAG VVARELDITL TARGRDKNGD
RMPLAGVPHH AAEGYIARLV NKGYKVVICD QVEDPKTAKG IVKRDVTRVI TPGTLIDSSM
LASAGAHYLM AVAPDRKETF GLAFLDVSTG EFFVSSGSGG REYAEIVSEV VRYRPTEAIV
PESFGDTLPA RLESLGVPVS RYRDDAFDPD AAYERLCGQF GTTTLDGYGC AGMPGAVAAA
GAALCYAQET QQSSLSHISG LSTRVPSGNM ALDAITLRNL EITAGIRGEG DGSTLLSALD
VTETSMGSRT MRSFLIAPLL GKDAIEARLD AVEWFFDHAL ERQALRATLG DFADTERIAG
RIAYGNAGPR DLATLRDSLC AIPDVKTLFP TDAPVRVHDA LDAMSDHAAV TDLIGRAIVD
EPPATARAGG MIREGYNAKL DELRHLATSG KDWIAEFQQQ ERERTGIKSL KVGYNRVFGY
YIEVTRPNLH LVPPEYERRQ TTANGERYTI PDLREKEAMI ATAEERLTAL EAEIYTELVR
TLVAEVAGIQ ATARAVGLLD VYSALAEVAA RYGYTRPAIE ESGRVVIRDG RHPVVERHLP
VPFVPNDTEL DSAADQIMII TGANMAGKST YMRAVALCCI MAQVGSFVPA RHATIGIVDR
VFTRVGAFDD LASGQSTFMV EMLELANILN NATAGSLVIL DEIGRGTSTL DGCAIARAVV
EFLHGKAVAG PRTLFATHFH DLIDLEGTLK RVKNFHFAVK DTGTDVVFLR KIIPGATDRS
YGVHVAHLAG IPKKVTDRAM EILKEASARE FSGGPRAPRY TQMLLVDPGE RAVQENPAVR
ELKDLNPNEM TPIEALTTLC RLQRIANGER ER
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