Gene Memar_1939 details

Gene Information

• Locus tag: Memar_1939
• ID: 4846139
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1933875
• End bp: 1934348
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640116645
• Product: UspA domain-containing protein
• Protein accession: YP_001047847
• Protein GI: 126179882
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0589] Universal stress protein UspA and related nucleotide-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGAAC GCATCCTGTT TCCAACGGAC TTTTCAGTGC CATCGATGAA GGTGCTGGAC 
TATATCCCCG TGCTGCACGA GGCGGGAACC CGGGAGGTGG TTCTCGTCCA CGTCATCGAC 
TCAAAGGAGA TCACGCTGAT CGCCTCGGGC GGGCAGGGGT TCCTCGGGAC CGTGCCCGAC 
CGGGAGACCG AGGCGCAGAG GGAGCTACGG GAAGAGATCC AGCACCGGAT CGTCGATACC 
CGCCGGGCGC TCGAGAGACA GGGCGTGAAG GTGACCGTCC GGACGCCCCT CGGCACCCCG 
GGGAAGGAGA TCGTGGCCGC GGCCGATGCG GAAGGAGCGT CGCTCATCGT CATCGGCTCC 
CACGGCCGGT CGAACATCCG CGACCGCCTG CTCGGGACGG TCTCGGAGTA CGTGATCAAG 
AACGCCCGTC AGCCGGTTCT GGTCATCAAG CGGGAGGTGA TCGGGGGGAG ATAG 

 

Protein sequence

MFERILFPTD FSVPSMKVLD YIPVLHEAGT REVVLVHVID SKEITLIASG GQGFLGTVPD 
RETEAQRELR EEIQHRIVDT RRALERQGVK VTVRTPLGTP GKEIVAAADA EGASLIVIGS 
HGRSNIRDRL LGTVSEYVIK NARQPVLVIK REVIGGR