Gene Memar_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1937 
Symbol 
ID4847172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1931913 
End bp1932731 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID640116643 
Productnitrogenase 
Protein accessionYP_001047845 
Protein GI126179880 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.894359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA TCGCCCTCTA CGGGAAGGGG GGAATCGGGA AATCCACCAC TGCGGCGAAC 
CTGTCGGCAG CACTCGCGGG AGAAGGGCTC GATATCCTGC AGATCGGCTG CGATCCGAAG
CACGACAGCA CCCGCATGCT GATGCACGGG ACCTGGATCC CGACGGTCCT CGATCTCATC
CGGGAGCGCG GAGACGAGAA GATAACCGTC GACGACGTGG TCTACCGGGG CTTTCGGGGC
GTCCGCTGCG TGGAGGCCGG AGGGCCCGAG CCCGGGATCG GGTGCGCCGG CCGGGGGATC
ATCGCGACGT TCCAGCTCCT CGAACGCCTG AACGCCCTCA AGGGCGACGT GATCGTCTAC
GACGTCCTGG GTGACGTCGT CTGCGGCGGG TTTGCGATGC CGATGCGCGA GGGCTACGCC
CAGGAGATCT ACCTGGTCAC CTCCGGCGAG TTGATGTCCA TCTACGCGGC AAACAACATC
GCAAAAGCCA TTGCGCGGCT CTCGCGCCGG GTGCGGAGCA GGTGCACGCT CGGGGGCGTG
ATCTGCAACG CAAAGAACAT CGAAGGCGAG CGGGAACTCG TTGACGAGTT CGCCCGCCGG
ATCGGCTCCC GGCTCATCGC CTACATCCCC CGCTCGAGGA TCGTCCAGGT CGCGGAGCTG
CAGAAACAGA CGGTCGTCGA ATACGCCCCC GAATCCGACC AGGCGGCGGT CTACCAGGAA
CTCGCGCGGA CGGTCTACGG AAACGAGACG ACGAGCATCC CCACACCTCT CGAGATGGAT
GAACTCGAAT CCTTCGCCCT CGAATTCGTC CAGGTTTGA
 
Protein sequence
MKQIALYGKG GIGKSTTAAN LSAALAGEGL DILQIGCDPK HDSTRMLMHG TWIPTVLDLI 
RERGDEKITV DDVVYRGFRG VRCVEAGGPE PGIGCAGRGI IATFQLLERL NALKGDVIVY
DVLGDVVCGG FAMPMREGYA QEIYLVTSGE LMSIYAANNI AKAIARLSRR VRSRCTLGGV
ICNAKNIEGE RELVDEFARR IGSRLIAYIP RSRIVQVAEL QKQTVVEYAP ESDQAAVYQE
LARTVYGNET TSIPTPLEMD ELESFALEFV QV