Gene Memar_1932 details

Gene Information

• Locus tag: Memar_1932
• ID: 4848243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1926306
• End bp: 1927010
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640116638
• Product: deoxyribonuclease V
• Protein accession: YP_001047840
• Protein GI: 126179875
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1515] Deoxyinosine 3'endonuclease (endonuclease V)

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGATCA GAGAGATCCA CCCCTTCGAC CTGACGCCGG CGGAAGCGAT CCGCATCCAG 
GAGAGGCTCC GGGAGCAGGT TCGCCGTTCC GGGGAAGCCG GGGAGGTCTC CCTCGTGGCC 
GGCACCGACG CCTCCTATGC AAAGGGTTCG GACGTCATCC ACGCGGTCGT CGTCGCCCTC 
AGTTACCCCG ATCTCACCGT CGTCGAGCGG GTCTCCGCCG CCGCCGTGAC GACGTTCCCC 
TATATCCCCG GCCTCCTGAC CTTCCGGGAA GGCCCCGCCC TCCTCGAGGC GTTCCGGAGA 
CTGCGCTCCG AGCCGGACGT GGTCTTCTTC GACGGACAGG GGATTGCCCA CCCCCGGGGG 
CTCGGCATCG CGAGCCACAT GGGCGTCCTC CTGGACCGGC CCGCCATCGG GGTCGCGAAG 
AGCCTCCTTC TCGGCACGGC GGCCGAGCCC GCGGGGGAGA GGGGATCGAC CGCCCCGATA 
CTCCGCGACG ATGAGACGAT CGGGATGGCA GTGCGGACGA GAGAGAGGGT GAAGCCCGTC 
TACGTCTCGG TGGGCCACCG GATCGATCTC GCGCAGGCGG TCGACCTCGT CCTCGCGACC 
GCACGGGGAT ACCGGCTCCC GGAACCGACC CGGCAGGCCC ACCTCTTTGC AAACGCCGTC 
AGGAGGGGAG AAGGGCAGGC CACCCTCTCT TCCTCCACGA AATAG 

 

Protein sequence

MEIREIHPFD LTPAEAIRIQ ERLREQVRRS GEAGEVSLVA GTDASYAKGS DVIHAVVVAL 
SYPDLTVVER VSAAAVTTFP YIPGLLTFRE GPALLEAFRR LRSEPDVVFF DGQGIAHPRG 
LGIASHMGVL LDRPAIGVAK SLLLGTAAEP AGERGSTAPI LRDDETIGMA VRTRERVKPV 
YVSVGHRIDL AQAVDLVLAT ARGYRLPEPT RQAHLFANAV RRGEGQATLS SSTK