| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1930 |
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| Symbol | |
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| ID | 4846945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1924337 |
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| End bp | 1925926 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640116636 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001047838 |
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| Protein GI | 126179873 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGG CCGACGTGCT GGTCTCGGAG CTCGCGGCCT GGGGGATCAC CCTGTACTTC
GGCATCCCCG GCTCATCGTC GCTCCCGCTC GTGGACGCGG TCAGGAGGAA CCCGGATGCG
CACTATGTCG TCGTCCGGCA CGAGCAGACC GCGGCGCTCG CGGCCTCGGC CTACAACAAG
TTCACGGGGA AAGTCGCCGT CTGCCTGACC ATCGCCGGGC CGGGGGCGAC GAACCTCGCC
ACCGGCCTGT ATGACGCGAA GGAAGATCGG GCGAGCGTGC TCTCCCTGAA CGGGCAGGTG
CAGGCGCAGT ACGCCGGCCC CGGCGGCGTC CAGGAGATCG ACCAGGACGC GTTCTTCCGC
CCGATAGCGG TCTTCAACAA CACCGTCGCC GACCCGTCGA CGGCGGTCAA ACTCCTCACC
CGGGCGCTCC GGTACGCGAT CGTCGGCCGC GGCGTCGCCC AGTTGTCCCT CCCGAACGAT
ATCCAGAGGG AGGCGCTCGA GCCTGCCTAC TGCGAACGCG AGACCTGCCT CTCCTCGGTC
ACGGCGGCCC CGACCGACGA GGCTGTCCGG GCGGCGGCGG AGGCGATCGA CGGCGCCGCA
CGGCCGGTCA TCCTCGCGGG ATTCGGCGCC ATGCGTGCGG CGGGAGCGGT CCTCGATCTT
GCAGAGACGA TCCGGGCGCC TATCGTCACC ACCTTCCGGG CGAAGGGCAT CCTCCCCGAC
GAGAACGAGT GGATCGCCGG GGTGCACGGG CCGCTCGGGA CGCCGCACGC CGAGAGGCTC
GTCGCGGAGT CGGACGTCGT GATCGCCTGC GGGGCGAGTT TCTCCGACTT CACCGGGATC
CCCGGTGAGA AGCGGGCCGT CCATATCGAT ATCGACCCAC TCCAGCTCGG CAAACACCCG
CTCGCGGCAG GGGTCTATGG CGACTGCGCC GTTGCCATAC CGATGATTCG GGAACGGGTC
AGGCCGCGGG AGGACACGGA GGTCGGGGCG TGGCTTGCCG GGCAGAAGCA GGAATGGCTC
AACCAGCTCG ACCGGGAGGC CGACCCGGAG GCGGTCCCCA TCCGCCCGCC CTACATCATG
AAAGTCCTCT CCGAGACCCT TCCGGAGGAC GCGGTCATCT CCCTCGACGT CGGGGAGAAC
CAGTGGTGGT TCGGGAGGAA CTTCCGGATG AAGCGGCAGC GGTTCGCGAT GTCCGGCTAC
CTCGGGACGA TGGGGTTCGG GCTCCCCGGG GCGATTGCGG CGAAACTCGC CTACCCCGAT
GCGACCGTCG TCTGCATCAC CGGGGACGGG GGATTCTCGA TGGTCATGGC CGACTTCGTC
ACGGCGGTCA AGTACGATCT CCCCATCGTC GTCGCGATCA TGAACAACCA CGAACTTGCC
ATGATCCGGG AGGAGCAGAG GGAGGCGAAC TATCCGCCCT ACGGCACCGA ACTCACGAAT
CCGGACTTCG TGGCGTATGC GGAGGCCTGC GGCGGTGCCG GGATACGGGT GGCCCGGCCA
CAGGACCTTG CGGATGCGGT TCTCCAGGCT ATCCGGATGA ATGTGCCCGT CGTCGTCGAT
ATCGAGACCG ATCCGAAACG GTTCGAGTAA
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| Protein sequence | MTVADVLVSE LAAWGITLYF GIPGSSSLPL VDAVRRNPDA HYVVVRHEQT AALAASAYNK
FTGKVAVCLT IAGPGATNLA TGLYDAKEDR ASVLSLNGQV QAQYAGPGGV QEIDQDAFFR
PIAVFNNTVA DPSTAVKLLT RALRYAIVGR GVAQLSLPND IQREALEPAY CERETCLSSV
TAAPTDEAVR AAAEAIDGAA RPVILAGFGA MRAAGAVLDL AETIRAPIVT TFRAKGILPD
ENEWIAGVHG PLGTPHAERL VAESDVVIAC GASFSDFTGI PGEKRAVHID IDPLQLGKHP
LAAGVYGDCA VAIPMIRERV RPREDTEVGA WLAGQKQEWL NQLDREADPE AVPIRPPYIM
KVLSETLPED AVISLDVGEN QWWFGRNFRM KRQRFAMSGY LGTMGFGLPG AIAAKLAYPD
ATVVCITGDG GFSMVMADFV TAVKYDLPIV VAIMNNHELA MIREEQREAN YPPYGTELTN
PDFVAYAEAC GGAGIRVARP QDLADAVLQA IRMNVPVVVD IETDPKRFE
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