| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1926 |
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| Symbol | |
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| ID | 4846283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1919608 |
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| End bp | 1920609 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640116632 |
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| Product | flap endonuclease-1 |
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| Protein accession | YP_001047834 |
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| Protein GI | 126179869 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTTG CTATCCGAGA CATCCTGGCA GACTGTAAAG AAACGTTGAC GTGGGACGAT
CTATCCGGCA TCGCCGCATT GGACGCTCAT AACGCACTTT ACCAGTTCCT TTCCATCATC
CGGCAGCCGG ACGGCACACC GCTGATGAAC GGTGCGGGCC GGATCACCTC GCACCTCTCC
GGCATCCTCT TTCGGACGGT GAACTTCCTG GAAAAGGGCA TCCGCCCGGT CTTTGTCTTC
GACGGGAAGC CCCCGGAGTT CAAGCAGGAG ACGATCAACG AGCGGCGCGA ACATCGCGCC
CGGGCCGACG AGGCCTGGAA GACGGCGCTC CGGGAAGGCG ATATGGAGGA GGCCTACAAG
CAGGCGAGCG CATCCGCCCG TATCGACAGC CACACCATCG CATCGTCCCG CGAACTCCTC
GACCTGCTCG GCATCCCCTG GGTGCAGGCG CCGAGCGAGG GCGAAGCGCA GGCGGCTTAC
ATGGCGCGGC AGGGGAAGGT CACCTACGCG GTCTCCCAGG ACTACGACTC GCTTCTCTTC
GGGTCCCCGG TGCTGGTCCG GAACCTCACC GTCAGCGGGC GGCGAAAGAC CAGGGGACGG
ACGATCACGG TGAACCCCGA GAGGATCGTC CTCTCCTCCT TCCTCGACCG TCTCGGCGTC
ACGAGAGAGC AGCTCGTCAA GATCGGCATC CTGGTGGGCA CGGACTTCAA CCCGGGGATC
CGGGGCGTCG GCGGCAAGAC GGCCTTGAAG ATCGTGCGGA ACGGCGAGTT CGAGTCCGTG
ATCGCCGAGA AGCAGCCCGA CTTCAACCCC GCCCCCATAC GCGACTTCTT CCTCAACCCG
CCGGTCACCG ACGACTACAC CCTCGAGTGG AGGACGCCGG ACGTCGAGGG CGTCGTGGAG
ATGCTCTGTG GCCGCTACGA CTTCTCCGAA GAGCGCGTCA GGAGCGCTCT CGCCAAGGTC
TCGGTGAAGG CGACCCAGAA GACGCTGGAT GCCTGGTTCT GA
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| Protein sequence | MGVAIRDILA DCKETLTWDD LSGIAALDAH NALYQFLSII RQPDGTPLMN GAGRITSHLS
GILFRTVNFL EKGIRPVFVF DGKPPEFKQE TINERREHRA RADEAWKTAL REGDMEEAYK
QASASARIDS HTIASSRELL DLLGIPWVQA PSEGEAQAAY MARQGKVTYA VSQDYDSLLF
GSPVLVRNLT VSGRRKTRGR TITVNPERIV LSSFLDRLGV TREQLVKIGI LVGTDFNPGI
RGVGGKTALK IVRNGEFESV IAEKQPDFNP APIRDFFLNP PVTDDYTLEW RTPDVEGVVE
MLCGRYDFSE ERVRSALAKV SVKATQKTLD AWF
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