Gene Memar_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1924 
Symbol 
ID4846890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1918282 
End bp1919187 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content62% 
IMG OID640116630 
Producthypothetical protein 
Protein accessionYP_001047832 
Protein GI126179867 
COG category[S] Function unknown 
COG ID[COG3389] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATAC GCGACTGGCT GCCTCTTCTT GGAATGCCCC TGATGCTTTT GTTCGTCCAG 
ATCATCGCTA TCGTCCTCGT CATGCCGATG CAGGCGGCGG GGCTTGTTGC GTTTGAAGAT
CCCGAATCGG TGGCGAATCC CCTGATATTT ATAGGGATGC TGCTCGCCTT CACCCTGGTC
CTGCTCGTCC TGCTCCGGAC GGGGGGTCGG CGTTTTATCG CTGCGTTCAT CGGGTTTGCC
CTCTTCATGA CGTTCCTCTA CATATTCGGT GCGCTCTCTC TCCTCGCGCT CGGGCCCACC
ACCGCCGCGG CGGCGGGGAC GCTCATCGGT GCCGTTGCGG TGACTGCGCT CCTCTACCTC
TACCCGGAAT GGTACGTCAT CGATATCCTC GGCGTGCTGA TATCCGCCGG GGTTGCCTCC
ATCTTCGGGA TATCCCTCGC CGTCCTGCCG GTGCTCGTGC TGCTCGTGCT GCTCGCGGTC
TACGACGCCA TATCGGTCTA CCGGACGAAA CACATGATCA CGCTGGCCGA AGGCGTCCTC
GAGACGAAGG CGCCCATAAT GGTCGTGGTT CCGAAGAGAG CGGACTACTC GTTCAGGAAA
GAGGGGCTCA ACATCAGTGA GGGGGAGGAG CGCGGCGCGT TCGTCATGGG TATGGGCGAT
CTCATCATGC CCTCGATCCT TGTCGCGTCG TCGCACGTCT TCGTGGATGC GCCCGCAGTC
CTCTGGACCC TCTCCGCCCC GACACTCGGC GCGATGGTGG GGTCGCTCGT CGGCCTTGCG
GTGCTCCTCT ACTTTGTCAA CAAGGGCAAC CCCCAGGCGG GTCTCCCCCC CTTAAACGGC
GGGGCTATTC TTGGGTTTCT GGTTGGGGCG GCTCTCGCAG GTTCGTTTTC GTGGCTTCCT
TTCTGA
 
Protein sequence
MQIRDWLPLL GMPLMLLFVQ IIAIVLVMPM QAAGLVAFED PESVANPLIF IGMLLAFTLV 
LLVLLRTGGR RFIAAFIGFA LFMTFLYIFG ALSLLALGPT TAAAAGTLIG AVAVTALLYL
YPEWYVIDIL GVLISAGVAS IFGISLAVLP VLVLLVLLAV YDAISVYRTK HMITLAEGVL
ETKAPIMVVV PKRADYSFRK EGLNISEGEE RGAFVMGMGD LIMPSILVAS SHVFVDAPAV
LWTLSAPTLG AMVGSLVGLA VLLYFVNKGN PQAGLPPLNG GAILGFLVGA ALAGSFSWLP
F