| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1915 |
|---|
| Symbol | |
|---|
| ID | 4846958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1910090 |
|---|
| End bp | 1911238 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640116621 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_001047823 |
|---|
| Protein GI | 126179858 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCGA GACGCATGGA TCACCTTCCC CCCTACCTTT TTGCACGCAT TGACGAGATG
AAAGAGGAGA AGCAGCGTCA GGGTGTCGAC GTCATCGACC TCGGGGTCGG CGACCCGGAT
CTTCCCACCC CGCCGCACAT CGTGGAGGCG CTCTGCGACG CGGCCAGGAA CCCGAAGAAC
CACCACTACC CCTCCTACAC CGGCATGCTC GCCTACCGCG AGGCGGTGGC CGACTGGTAC
CGGACCCGGT TCGGGGTCGA CCTCGACGCG AAAAAGGAGA CCCTCGCGCT CATCGGCTCG
AAAGAAGGCA TCGCGCACAT CGCCGAGGCC TTCGTCAACC CCGGGGAGGT CGTCCTCGCC
GCCGACCCGG GTTACCCGGT CTACAAGACC TCCACGCTCT TTGCCGAGGG CAAAGTCCAC
GAGATGCCCA TCCGCGCCGA GAACGACTTC CTCCCGGTGC TCGAGGATAT CCCTGCCGAC
GTCGTGAAGC AGGCGAAGTT GATCTTCATC AACTACCCGA ACAACCCCAC AGCCGCAATA
GCGCCCCTCT CGTTCTTCGA GGAAGTCGTC GAGTTTGCGC GGGAGCACGA GATCGTCGTC
GTCCACGACA ACGCCTACTC TGAGATCACC TTCGACGGCT ACCGGGCGCC CTCGTTCCTC
GAGGCCGACG GCGCGATGGA GGTCGGGGTC GAGATGCACT CGCTCTCGAA GACCTACAAC
ATGACCGGGT GGCGGATCGG GATGGCCTGC GGAAACCCGG AGATCGTCGC AGGGCTCGGC
CGGGTCAAGA CCAACGTCGA CTCGGGCGCG TTCAACGCCA TCCAGCACGC CGCGATCACC
GCGCTCACCG GCCCGCAGGA CTGCATCTCG GAGGCCTGCT CGGTCTACCG GGAACGCCGG
GACGTGCTCG TGAAAGGGCT TTCCGAGATC GGGCTCGACG TCACGGCGCC GAAGGCCACC
TTCTACGTCT GGGCACCGGT CGACGACAGC ATGGCGTTTG CCGCACAGCT CCTCGACAAA
GCCGGGATCG TCGCGACCCC GGGCATCGGG TTCGGCAAGA ACGGCGAAGG ATTCATCCGG
TTCGCGATCA CCCGGTCGAT CGAGCGGATC AACGAGGCCG TAGAGCGGAT GCGGGGGATT
GACCTGTGA
|
|---|
| Protein sequence | MYSRRMDHLP PYLFARIDEM KEEKQRQGVD VIDLGVGDPD LPTPPHIVEA LCDAARNPKN
HHYPSYTGML AYREAVADWY RTRFGVDLDA KKETLALIGS KEGIAHIAEA FVNPGEVVLA
ADPGYPVYKT STLFAEGKVH EMPIRAENDF LPVLEDIPAD VVKQAKLIFI NYPNNPTAAI
APLSFFEEVV EFAREHEIVV VHDNAYSEIT FDGYRAPSFL EADGAMEVGV EMHSLSKTYN
MTGWRIGMAC GNPEIVAGLG RVKTNVDSGA FNAIQHAAIT ALTGPQDCIS EACSVYRERR
DVLVKGLSEI GLDVTAPKAT FYVWAPVDDS MAFAAQLLDK AGIVATPGIG FGKNGEGFIR
FAITRSIERI NEAVERMRGI DL
|
|---|
| |