| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1907 |
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| Symbol | |
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| ID | 4847742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1903076 |
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| End bp | 1905808 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640116613 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001047815 |
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| Protein GI | 126179850 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAATC CTCCTAACAG CATTCCAGTG ATGACGCTGT GCCTGGTCGC TGCAACCCTG
CTGCTGATCG GCACCGCAAG CGCTGCCGCA CCTGACGCGG CGTTCAGCAG CAACACAATT
TCCGGACCAG CGCCCCTGAC TGTACAGTTC ACCGATAACT CGGCCGGCGG CCCGGACGGG
TGGGCGTGGT TCTTCGGCGA CGAGACGTAT AACGGGACGT GGACGGCGGT GAACACGAGC
GCCGGGTGGT CGGCAAGAGG GGGGCACACC AGCGTCGTGA TGCCGAACGG GAGCATCATA
CTCATGGGCG GAATTGACGG CGGCTCAAGG AACGACGTGT GGCTATCAAC GGATAACGGT
GCAACCTGGG AAAATATCAC GCCGCACGAC CCCAATGACA TATGGTCAGG ACGATACGGC
CATGCGGCGG TCGCGGTCAA TGATACCATC GTTCTCATGG GCGGCATGAA CGTCATGGGC
GACGAGTACA CCTTAAAAAA CGATGTGTGG CAGTCGCGCG ATTACGGCGC GACATGGACA
TGCGTGAACA CGAGTCCCGG GTGGTTGGCA AGATACGCTC ACACCAGCGT CGCGATGCCG
GATGGAAGCA TCGTACTCAT GAGTGGTACC ACCGGTTCCG GCCTGAAAGA CGTCTGGAAG
TCGCCTAGTA GTGGCAGAAC CTGGGAGCGG ATGACCGACA TCACCGACAG CGCAGAGTGG
CCAGGAGAAG GCCCCACCAG CGTCGTACTG CCGGACGGGA GCATCGTAAT CATGGGCGGG
GCGGGCAGCT CGGGCAGGGT ATGGAAGTCG ACCGACGGCG GGGCCATATG GACGGAGTTG
TCCAACCCCG GGGAGGGGTA CTCAAGATAC TCTCACACCA GCGTCGCGAT GCCGGACGGG
AGCATCGTAA TCATGGGCGG CTGGTACCTC GGCCTGAAAA ACGACGTCTG GCGGTCGACC
GACAACGGCA CGACATGGAC GCAGGTGACC GAGCACGCCG AGTGGTCGCC AAGGCTGGGC
CACACCTCCG TCGCGATGCC GGACGGGAGC ATCGTAATCA TGGGCGGGGA TGGCAGCACG
AGCGACGTCT GGCGCCTTGA AACCGCAGGA TCAAACGCCC GGAACCCATC GCACACCTAT
ACCACCCCGG GCACCTACAC GGTAACGCTG CAGGCATACA ACGACGACGG TTACAACGTC
ACGCGACAGG TCATCACGGT CACGGCTGCG GTCGCCCCGA CGGCAAACTT CACCGCCAAC
CGGACTTCCG GCACCGCGCC GCTCGCCGTG CAGTTCAATG ACACCTCGAC AGGAGGACCG
ACTTCGTGGG CCTGGGACTT CGGCGACGGC GAAACCTCGA CCGATCAGAA CGCCACCCAC
ACCTACGCCG CCGCCGGAAA CTACACCGTC AGCCTGAATG CCACCAACGC AGCAGGAAGC
AACACGCACA CCGAGACCGA CTACATCACG GCCTCCGCTG TACCGGTTCC GCCAGTGGCA
AACTTCACCG GCACGCCGAC CTCCGGCACC GCGCCGCTCG CCGTGCAGTT CAACGACACC
TCGACAGGAG GACCGACCTC GTGGACCTGG GACTTCGGTG ACGGTGAAAC CTCGACCGAT
CAGAACGCCA CGCACACCTA CGCCGCCGCC GGAACCTACA CCGTCAGCCT GACGGCCACC
AACGCAGTAG GAAGCGACAC GCACACCGAG ACCGACTACA TCACGGTCTC CGCCGCACCG
GTTCTTCCGG TGGCAAACTT CACCGGCACG CCGACCTCCG GCACCGCGCC GCTCGCCGTA
CAGTTCAACG ACACCTCGAC CGGCGGCCCG ACCGCCTGGA ACTGGTCGTT CGGTGACGGC
ACGTGGCACA ACACCACGGA CGTAGCAGAG AGGAACGCCA CGTACACCTA CGCCGCCGCC
GGAACCTACA CCGTCAACCT GACGGTCGAT AACGCGGACG GAACCGACAT GCTCTCCCGG
GCCGGCTACA TCACGGTCAC GGGCTCAACC CCAACCGTAA CCCCAACTGT AACCCCAACC
GTAACCCCAA CCGTAACCCC AACCGTAACC CCAACCAGCA GGCCGGTCTA CAGCGGCGGT
GGCGGCGGCG GTTCGACGGG CGGGCCGGAC GGCTATAACG TGGGCGGCGA CTCCGCCGTG
AGCAAGGTCG CCGTCGCCGG CACCGGGCTC AAGACGTTCA TCATCACCGG CTGGAAGCAG
TCCTCCCCGG GAACCGGGAT TCCCCCTGCA CCGGGCACCC CATACCAGTA CGTCGACCTG
GTGCCGGCCC GGTTCGAGGA GATCACCGGG GCGAACATCA CCTTCTCCGT CCCGCAGACG
TGGCTCGATG AGCACGGATT TGCCCCTGAA GATATCGTGC TCTACCACTA CAACGGCACG
GCATGGGAAG CCCTCCCGAC GACGGTCAAG GGTACCGCCG GGACGGCAGT CACCTTCACC
GCAATGACCC CCGGATTCTC CCTCTTTGCG ATCACCGGGA TAGAGCAGGC CGGTGGGGTG
ACGACCCCGA CGGCGACAAC GCCGCCGGCG ACGGCAGAAC CCACCGCGAC AGAGACCGCG
GCCGCACCGG CCGGCGGGCC GGCACCCGAG TTCCCGCTCG GAACGGTCGC CCTTGTCGCC
GGGGTGATCC TGGTGCTCGC CGGGGCCGGC TACCTGGTTC GCCGCTGGTG GATCATACGG
CAGAACCCGG CGCTCTTCCA GAAATACGAT TGA
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| Protein sequence | MGNPPNSIPV MTLCLVAATL LLIGTASAAA PDAAFSSNTI SGPAPLTVQF TDNSAGGPDG
WAWFFGDETY NGTWTAVNTS AGWSARGGHT SVVMPNGSII LMGGIDGGSR NDVWLSTDNG
ATWENITPHD PNDIWSGRYG HAAVAVNDTI VLMGGMNVMG DEYTLKNDVW QSRDYGATWT
CVNTSPGWLA RYAHTSVAMP DGSIVLMSGT TGSGLKDVWK SPSSGRTWER MTDITDSAEW
PGEGPTSVVL PDGSIVIMGG AGSSGRVWKS TDGGAIWTEL SNPGEGYSRY SHTSVAMPDG
SIVIMGGWYL GLKNDVWRST DNGTTWTQVT EHAEWSPRLG HTSVAMPDGS IVIMGGDGST
SDVWRLETAG SNARNPSHTY TTPGTYTVTL QAYNDDGYNV TRQVITVTAA VAPTANFTAN
RTSGTAPLAV QFNDTSTGGP TSWAWDFGDG ETSTDQNATH TYAAAGNYTV SLNATNAAGS
NTHTETDYIT ASAVPVPPVA NFTGTPTSGT APLAVQFNDT STGGPTSWTW DFGDGETSTD
QNATHTYAAA GTYTVSLTAT NAVGSDTHTE TDYITVSAAP VLPVANFTGT PTSGTAPLAV
QFNDTSTGGP TAWNWSFGDG TWHNTTDVAE RNATYTYAAA GTYTVNLTVD NADGTDMLSR
AGYITVTGST PTVTPTVTPT VTPTVTPTVT PTSRPVYSGG GGGGSTGGPD GYNVGGDSAV
SKVAVAGTGL KTFIITGWKQ SSPGTGIPPA PGTPYQYVDL VPARFEEITG ANITFSVPQT
WLDEHGFAPE DIVLYHYNGT AWEALPTTVK GTAGTAVTFT AMTPGFSLFA ITGIEQAGGV
TTPTATTPPA TAEPTATETA AAPAGGPAPE FPLGTVALVA GVILVLAGAG YLVRRWWIIR
QNPALFQKYD
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