Gene Memar_1904 details

Gene Information

• Locus tag: Memar_1904
• ID: 4847174
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1899292
• End bp: 1899894
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640116610
• Product: CDP-alcohol phosphatidyltransferase
• Protein accession: YP_001047812
• Protein GI: 126179847
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTCG ACCAGTTCCG GCCGCAGGTG CAGGGCATCA TTCAGCCCGT GGTGAACCTG 
ATGCGAAGGA TCGGGGTTAC CCCGAACGCG CTGACGATTG CATCGTTCCT CGTCTCGGCA 
CTTGCGGGTA TCGCGTTCTA TGCCGGAGGA GTCGTCTTCG GCACCGTCAT GGTCGCGTTC 
AACGCCGTCT TCGACGCGCT CGACGGGGCG CTCGCCCGGG ACATGGGGAT CGCGGGCATC 
CGCGGGGACT TTCTCGATCA CGTCATCGAC CGCTACGCCG ACATATTCAT CATCACCGGG 
ATATTTGCGG GCGGGGCCGC ACCCTGGCAG ATCGGCGTCT TCGCGCTGAC GGGCGTTCTG 
ATGTCCTCCT ACCTCGGCAC CCAGGCGCAG GCCGTCGGGG TGGGCAGGTT CTACGGCGGC 
ATCCTCGGCC GGGCGGATCG TCTCGTGCTG ATCATCATCG CCGGCGCCCT TACCGTGCTG 
ATCCCGGGAG CGATCTACGG CCTGAACTAC CTCGGATGGC TCCTCATCAT ATTCGGTTTC 
CTCGGGCACT ACACTGCGTT CCAGCGTTTC GTCCACGTAT GGCGGCAGAT AGAAAAACAG 
TAG 

 

Protein sequence

MTLDQFRPQV QGIIQPVVNL MRRIGVTPNA LTIASFLVSA LAGIAFYAGG VVFGTVMVAF 
NAVFDALDGA LARDMGIAGI RGDFLDHVID RYADIFIITG IFAGGAAPWQ IGVFALTGVL 
MSSYLGTQAQ AVGVGRFYGG ILGRADRLVL IIIAGALTVL IPGAIYGLNY LGWLLIIFGF 
LGHYTAFQRF VHVWRQIEKQ